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Vocal markers of autism: Assessing the generalizability of machine learning models

  • Astrid Rybner
  • , Emil Trenckner Jessen
  • , Marie Damsgaard Mortensen
  • , Stine Nyhus Larsen
  • , Ruth Grossman
  • , Niels Bilenberg
  • , Cathriona Cantio
  • , Jens Richardt Møllegaard Jepsen
  • , Ethan Weed
  • , Arndis Simonsen
  • , Riccardo Fusaroli*
  • *Corresponding author for this work
  • Aarhus University
  • Emerson College
  • Child and Adolescent Mental Health Centre
  • Center for Neuropsychiatric Schizophrenia Research and Center for Clinical Intervention and Neuropsychiatric Schizophrenia Research
  • Aarhus University Hospital
  • University of Pennsylvania

Research output: Contribution to journal › Journal article › Research › peer-review

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Abstract

Machine learning (ML) approaches show increasing promise in their ability to identify vocal markers of autism. Nonetheless, it is unclear to what extent such markers generalize to new speech samples collected, for example, using a different speech task or in a different language. In this paper, we systematically assess the generalizability of ML findings across a variety of contexts. We train promising published ML models of vocal markers of autism on novel cross-linguistic datasets following a rigorous pipeline to minimize overfitting, including cross-validated training and ensemble models. We test the generalizability of the models by testing them on (i) different participants from the same study, performing the same task; (ii) the same participants, performing a different (but similar) task; (iii) a different study with participants speaking a different language, performing the same type of task. While model performance is similar to previously published findings when trained and tested on data from the same study (out-of-sample performance), there is considerable variance between studies. Crucially, the models do not generalize well to different, though similar, tasks and not at all to new languages. The ML pipeline is openly shared. Generalizability of ML models of vocal markers of autism is an issue. We outline three recommendations for strategies researchers could take to be more explicit about generalizability and improve it in future studies. Lay Summary: Machine learning approaches promise to be able to identify autism from voice only. These models underestimate how diverse the contexts in which we speak are, how diverse the languages used are and how diverse autistic voices are. Machine learning approaches need to be more careful in defining their limits and generalizability.

Original languageEnglish
JournalAutism Research
Volume15
Issue number6
Pages (from-to)1018-1030
ISSN1939-3792
DOIs
Publication statusPublished - Jun 2022

Funding

We are very grateful to the participants in our studies and to the researchers and clinical practitioners who supported the collection of the data we analyzed in this project. We wish to thank our funding sources: the Interacting Minds Centre seed funding “Clinical Voices” and “Clinical voices in the wild” (RF and EW); the Danish Independent Research Council collective project “The Puzzle of Danish” (RF); and the Carlsberg foundation (AS). Lasse Hansen, Alberto Parola, Roberta Rocca and Kostas Sechidis provided invaluable feedback.

Keywords

  • autism spectrum disorder
  • biobehavioral markers
  • generalizability
  • machine learning
  • voice

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