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DeepTOFSino: A deep learning model for synthesizing full-dose time-of-flight bin sinograms from their corresponding low-dose sinograms

  • Amirhossein Sanaat
  • , Hossein Shooli
  • , Sohrab Ferdowsi
  • , Isaac Shiri
  • , Hossein Arabi
  • , Habib Zaidi*
  • *Corresponding author for this work
  • Geneva University Hospitals
  • Bushehr University of Medical Sciences
  • University of Applied Sciences and Arts of Western
  • University of Geneva
  • University of Groningen

Research output: Contribution to journal › Journal article › Research › peer-review

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Abstract

Purpose: Reducing the injected activity and/or the scanning time is a desirable goal to minimize radiation exposure and maximize patients’ comfort. To achieve this goal, we developed a deep neural network (DNN) model for synthesizing full-dose (FD) time-of-flight (TOF) bin sinograms from their corresponding fast/low-dose (LD) TOF bin sinograms. Methods: Clinical brain PET/CT raw data of 140 normal and abnormal patients were employed to create LD and FD TOF bin sinograms. The LD TOF sinograms were created through 5% undersampling of FD list-mode PET data. The TOF sinograms were split into seven time bins (0, ±1, ±2, ±3). Residual network (ResNet) algorithms were trained separately to generate FD bins from LD bins. An extra ResNet model was trained to synthesize FD images from LD images to compare the performance of DNN in sinogram space (SS) vs implementation in image space (IS). Comprehensive quantitative and statistical analysis was performed to assess the performance of the proposed model using established quantitative metrics, including the peak signal-to-noise ratio (PSNR), structural similarity index metric (SSIM) region-wise standardized uptake value (SUV) bias and statistical analysis for 83 brain regions. Results: SSIM and PSNR values of 0.97 ± 0.01, 0.98 ± 0.01 and 33.70 ± 0.32, 39.36 ± 0.21 were obtained for IS and SS, respectively, compared to 0.86 ± 0.02and 31.12 ± 0.22 for reference LD images. The absolute average SUV bias was 0.96 ± 0.95% and 1.40 ± 0.72% for SS and IS implementations, respectively. The joint histogram analysis revealed the lowest mean square error (MSE) and highest correlation (R2 = 0.99, MSE = 0.019) was achieved by SS compared to IS (R2 = 0.97, MSE= 0.028). The Bland & Altman analysis showed that the lowest SUV bias (-0.4%) and minimum variance (95% CI: -2.6%, +1.9%) were achieved by SS images. The voxel-wise t-test analysis revealed the presence of voxels with statistically significantly lower values in LD, IS, and SS images compared to FD images respectively. Conclusion: The results demonstrated that images reconstructed from the predicted TOF FD sinograms using the SS approach led to higher image quality and lower bias compared to images predicted from LD images.

Original languageEnglish
Article number118697
JournalNeuroImage
Volume245
ISSN1053-8119
DOIs
Publication statusPublished - 15. Dec 2021

Bibliographical note

Publisher Copyright:
© 2021 The Author(s)

Funding

This work was supported by the Swiss National Science Foundation under grant SNRF 320030_176052, the Eurostars program of the European commission under grant E! 114021 ProVision and the Private Foundation of Geneva University Hospitals under Grant RC-06–01.

Keywords

  • Brain imaging
  • Deep learning
  • Low-dose imaging
  • PET/CT
  • Time-of-flight

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