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• 2021

  Microbes trading electricity in consortia of environmental and biotechnological significance

  Rotaru, A-E., Yee, M. O. & Musat, F., 19. Jan 2021, (Accepted/In press) In: Current Opinion in Biotechnology.

  Research output: Contribution to journal › Literature review › Research › peer-review

  • Electricity
  • Electrons
  • Natural attenuation
  • Bioremediation
  • Environmental Biodegradation

• Microplastics do not increase bioaccumulation of petroleum hydrocarbons in Arctic zooplankton but trigger feeding suppression under co-exposure conditions

  Almeda, R., Torres, R. R., Rist, S., Winding, M., Stief, P., Hansen, B. & Nielsen, T. G., 10. Jan 2021, In: Science of the Total Environment. 751, 12 p., 141264.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Bioaccumulation
  • Microplastic
  • Petroleum
  • Hydrocarbons
  • petroleum hydrocarbon

• Mitochondrial Evolution in the Demospongiae (Porifera): Phylogeny, Divergence Time, and Genome Biology

  Plese, B., James Kenny, N., Eleonora Rossi, M., Cárdenas, P., Schuster, A., Taboada, S., Koutsouveli, V. & Riesgo, A., Feb 2021, In: Molecular Phylogenetics and Evolution. 155, p. 107011 14 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Demospongiae
  • Porifera
  • phylogeny
  • genome
  • divergence
• 2020

  Acetate-utilizing microbial communities revealed by stable-isotope probing in sediment underlying the upwelling system of the Ulleung Basin, East Sea

  Cho, H., Kim, B., Mok, J. S., Choi, A., Thamdrup, B. & Hyun, J. H., 23. Jan 2020, In: Marine Ecology Progress Series. 634, p. 45-61 17 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • stable isotopes
  • Colwelliaceae
  • Oceanospirillaceae
  • sediments
  • acetate

• An underappreciated DIET for anaerobic petroleum hydrocarbon-degrading microbial communities

  Aulenta, F., Tucci, M., Cruz Viggi, C., Dolfing, J., Head, I. M. & Rotaru, A-E., 30. Aug 2020, In: Microbial Biotechnology.

  Research output: Contribution to journal › Literature review › Research › peer-review

  Open Access

  File

  • Bioremediation
  • Environmental Biodegradation
  • Petroleum
  • Hydrocarbons
  • Microbiota
  9 Downloads (Pure)

• Cancer cells employ an evolutionarily conserved polyploidization program to resist therapy

  Pienta, K. J., Hammarlund, E. U., Austin, R. H., Axelrod, R., Brown, J. S. & Amend, S. R., 1. Dec 2020, In: Seminars in Cancer Biology.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  • Neoplasms
  • Cell Enlargement
  • Genome
  • Therapeutics
  • Chromatin

• Carbon isotopes in clastic rocks and the Neoproterozoic carbon cycle

  Canfield, D. E., Knoll, A. H., Poulton, S. W., Narbonne, G. M. & Dunning, G. R., Feb 2020, In: American Journal of Science. 320, 2, p. 97-124

  Research output: Contribution to journal › Journal article › Research › peer-review

  • clastic rock
  • carbon cycle
  • carbon isotope
  • sedimentary rock
  • carbonate

• Conserved novel ORFs in the mitochondrial genome of the ctenophore Beroe forskalii

  Schultz, D. T., Eizenga, J. M., Corbett-Detig, R. B., Francis, W. R., Christianson, L. M. & Haddock, S. H. D., 1. Jan 2020, In: PeerJ. 8, 1, e8356.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • Ctenophora
  • Mitochondrial Genome
  • mitochondrial genome
  • Open Reading Frames
  • Genes
  88 Downloads (Pure)

• Controls of H₂S, Fe^{2 +}, and Mn^{2 +} on Microbial NO₃^–-Reducing Processes in Sediments of an Eutrophic Lake

  Cojean, A. N. Y., Lehmann, M. F., Robertson, E. K., Thamdrup, B. & Zopfi, J., 16. Jun 2020, In: Frontiers in Microbiology. 11, 17 p., 1158.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • Denitrification
  • Lakes
  • Ammonium Compounds
  • Electrons
  • Sulfides
  30 Downloads (Pure)

• Convergent Evolution, Evolving Evolvability, and the Origins of Lethal Cancer

  Pienta, K. J., Hammarlund, E. U., Axelrod, R., Amend, S. R. & Brown, J. S., Jun 2020, In: Molecular cancer research : MCR. 18, 6, p. 801-810 10 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  • Neoplasms
  • Genetic Selection
  • Cell- and Tissue-Based Therapy
  • Decision Making
  • Therapeutics

• Cultivating electroactive microbes - from field to bench

  Yee, M. O., Joerg, D., Alfred, S. & Rotaru, A-E., 24. Apr 2020, In: Nanotechnology. 31, 17, 18 p., 174003.

  Research output: Contribution to journal › Literature review › Research › peer-review

  Open Access

  File

  • Microorganisms
  • Electrons
  • Electricity
  • Bioengineering
  • Cathodes
  51 Downloads (Pure)

• Estimating Respiration Rates and Secondary Production of Macrobenthic Communities Across Coastal Habitats with Contrasting Structural Biodiversity

  Rodil, I. F., Attard, K. M., Norkko, J., Glud, R. N. & Norkko, A., 2020, In: Ecosystems. 23, p. 630–647 18 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • Biodiversity
  • secondary productivity
  • respiration
  • Reefs
  • breathing
  68 Downloads (Pure)

• Expression of starch-binding factor CBM20 in barley plastids controls the number of starch granules and the level of CO2 fixation

  Zhong, Y., Sagnelli, D., Topbjerg, H. B., Hasler-Sheetal, H., Andrzejzcak, O., Hooshmand, K., Gislum, R., Jiang, D., Møller, I. M., Blennow, A. & Hebelstrup, K. H., 1. Jan 2020, In: Journal of Experimental Botany. 71, 1, p. 234-246

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • Plastids
  • Hordeum
  • Starch
  • Carbohydrates
  • Chloroplasts
  27 Downloads (Pure)

• Extracellular electron uptake in Methanosarcinales is independent of multiheme c-type cytochromes

  Yee, M. O. & Rotaru, A-E., 15. Jan 2020, In: Scientific Reports. 10, 1, 372.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • Methanosarcinales
  • Cytochrome c Group
  • Electrons
  • Geobacter
  • Proxy
  74 Downloads (Pure)

• Glycerol dialkyl glycerol tetraethers in surface sediments from three Pacific trenches: Distribution, source and environmental implications

  Xu, Y., Jia, Z., Xiao, W., Fang, J., Wang, Y., Luo, M., Wenzhöfer, F., Rowden, A. A. & Glud, R. N., Sep 2020, In: Organic Geochemistry. 147, 104079.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Sediments
  • Glycerol
  • trench
  • Organic carbon
  • sediment

• High throughput shotgun sequencing of eRNA reveals taxonomic and derived functional shifts across a benthic productivity gradient

  Broman, E., Bonaglia, S., Norkko, A., Creer, S. & Nascimento, F. J. A., 24. Jul 2020, In: Molecular Ecology.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • RNA Sequence Analysis
  • Firearms
  • organic carbon
  • Carbon
  • Biodiversity
  4 Downloads (Pure)

• Isotope abundance ratio measurements using femtosecond laser ablation ionization mass spectrometry

  Tulej, M., Neubeck, A., Riedo, A., Lukmanov, R., Grimaudo, V., Ligterink, N. F. W., Ivarsson, M., Bach, W., de Koning, C. & Wurz, P., Dec 2020, In: Journal of mass spectrometry : JMS. 55, 12, 17 p., e4660.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Femtosecond lasers
  • Laser ablation
  • Ionization
  • Mass spectrometry
  • Isotopes

• Mapping cold-water coral biomass: an approach to derive ecosystem functions

  De Clippele, L. H., Rovelli, L., Ramiro-Sánchez, B., Kazanidis, G., Vad, J., Turner, S., Glud, R. N. & Roberts, J. M., 4. Dec 2020, In: Coral Reefs.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  • ecosystem function
  • cold water
  • coral
  • reef
  • turnover

• Meiofauna improve oxygenation and accelerate sulfide removal in the seasonally hypoxic seabed

  Bonaglia, S., Hedberg, J., Marzocchi, U., Iburg, S., Glud, R. N. & Nascimento, F. J. A., Jul 2020, In: Marine Environmental Research. 159, 10 p., 104968.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • Oxygenation
  • meiofauna
  • Sediments
  • oxygenation
  • sulfides
  48 Downloads (Pure)

• Metabolism of a subtidal rocky mussel reef in a high-temperate setting: Pathways of organic C flow

  Attard, K. M., Rodil, I. F., Berg, P., Mogg, A. O. M., Westerbom, M., Norkko, A. & Glud, R. N., 9. Jul 2020, In: Marine Ecology Progress Series. 645, p. 41-54

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • reefs
  • reef
  • metabolism
  • eddy covariance
  • Mytilus trossulus
  15 Downloads (Pure)

• Nitrate reduction pathways and interactions with iron in the drainage water infiltration zone of a riparian wetland soil

  Petersen, R. J., Liang, Z., Prinds, C., Jéglot, A., Thamdrup, B., Kjaergaard, C. & Elsgaard, L., 2020, In: Biogeochemistry. 150, p. 235–255

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Wetlands
  • Infiltration
  • drainage water
  • Nitrates
  • Drainage

• No nitrogen fixation in the Bay of Bengal?

  Löscher, C., Mohr, W., Bange, H. & Canfield, D. E., 2020, In: Biogeosciences Discussions. 17, 4, p. 851–864 14 p.

  Research output: Contribution to journal › Journal article › Research

  Open Access

  File

  • Bay of Bengal
  • nitrogen fixation
  • fixation
  • oxygen
  • water column
  127 Downloads (Pure)

• Novel reference transcriptomes for the sponges Carteriospongia foliascens and Cliona orientalis and associated algal symbiont Gerakladium endoclionum

  Strehlow, B. W., Pineda, M. C., Kenkel, C. D., Laffy, P., Duckworth, A., Renton, M., Clode, P. L. & Webster, N. S., 20. Nov 2020, In: Coral Reefs.

  Research output: Contribution to journal › Comment/debate › Research › peer-review

  • symbionts
  • transcriptome
  • stress response
  • genes
  • history

• Organic Contaminant Mixture Significantly Changes Microbenthic Community Structure and Increases the Expression of PAH Degradation Genes

  Iburg, S., Nybom, I., Bonaglia, S., Karlson, A. M. L., Sobek, A. & Nascimento, F. J. A., Aug 2020, In: Frontiers in Environmental Science. 8, 16 p., 128.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • community structure
  • PAH
  • gene
  • degradation
  • pollutant
  48 Downloads (Pure)

• Oxygen-sensing mechanisms across eukaryotic kingdoms and their roles in complex multicellularity

  Hammarlund, E. U., Flashman, E., Mohlin, S. & Licausi, F., 23. Oct 2020, In: Science (New York, N.Y.). 370, 6515, 13 p., 421.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Oxygen
  • Animals
  • Hypoxia

• Poly‐aneuploid cancer cells promote evolvability, generating lethal cancer

  Pienta, K. J., Hammarlund, E., Axelrod, R., Brown, J. S. & Amend, S. R., Aug 2020, In: Evolutionary Applications. 13, 7, p. 1626-1634

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • cancer
  • neoplasm cells
  • neoplasms
  • cell
  • therapeutics
  21 Downloads (Pure)

• Pore water conditions driving calcium carbonate dissolution in reef sands

  Kessler, A. J., Rogers, A., Cyronak, T., Bourke, M. F., Hasler-Sheetal, H., Glud, R. N., Greening, C., Meysman, F. J. R., Eyre, B. D. & Cook, P. L. M., 15. Jun 2020, In: Geochimica et Cosmochimica Acta. 279, p. 16-28 13 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • calcium carbonate
  • porewater
  • reef
  • dissolution
  • sand

• Redox-sensitive trace metals as paleoredox proxies: A review and analysis of data from modern sediments

  Bennett, W. W. & Canfield, D. E., May 2020, In: Earth-Science Reviews. 204, 103175.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • trace metal
  • sediment
  • depositional environment
  • analysis
  • aluminum content

• Regulation of nitrous oxide production in low oxygen waters off the coast of Peru

  Frey, C., Bange, H., Achterberg, E., Jayakumar, A., Löscher, C., Arevalo-Martinez, D., León-Palmero, E., Sun, M., Sun, X., Xie, R., Oleynik, S. & Ward, B., 2020, In: Biogeosciences. 17, 8, p. 2263–2287

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • nitrous oxide production
  • nitrous oxide
  • Peru
  • denitrification
  • coasts
  49 Downloads (Pure)

• Single cell analyses reveal contrasting life strategies of the two main nitrifiers in the ocean

  Kitzinger, K., Marchant, H. K., Bristow, L. A., Herbold, C. W., Padilla, C. C., Kidane, A. T., Littmann, S., Daims, H., Pjevac, P., Stewart, F. J., Wagner, M. & Kuypers, M. M. M., 2020, In: Nature Communications. 11, 1, 767.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • Single-Cell Analysis
  • Oceans and Seas
  • Ammonia
  • oceans
  • Archaea
  64 Downloads (Pure)

• Sulfide alters microbial functional potential in a methane and nitrogen cycling biofilm reactor

  Delgado Vela, J., Bristow, L. A., Marchant, H. K., Love, N. G. & Dick, G. J., 9. Dec 2020, In: Environmental Microbiology.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Methane
  • Sulfides
  • Nitrites
  • methane
  • Nitrogen

• Syntrophus conductive pili demonstrate that common hydrogen-donating syntrophs can have a direct electron transfer option

  Walker, D., Nevin, K., Holmes, D. E., Rotaru, A-E., Ward, J., Woodard, T., Zhu, J., Ueki, T., Nonnenmann, S., McInerney, M. & Lovley, D. R., Mar 2020, In: I S M E Journal. 14, 3, p. 837–846

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Syntrophus
  • Bacterial Fimbriae
  • fimbriae
  • Hydrogen
  • Electrons

• Technical Note: Estimating light-use efficiency of benthic habitats using underwater O2 eddy covariance

  M. Attard, K. & N. Glud, R., 28. Aug 2020, In: Biogeosciences. 17, 16, p. 4343-4353 11 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • eddy covariance
  • light use efficiency
  • primary production
  • habitats
  • benthic flux
  23 Downloads (Pure)

• The fossil record of igneous rock

  Ivarsson, M., Drake, H., Neubeck, A., Sallstedt, T., Bengtson, S., Roberts, N. M. W. & Rasmussen, B., 2020, In: Earth-Science Reviews. 210, 20 p., 103342.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • fossil record
  • biosphere
  • fossil
  • life history
  • early Earth
  21 Downloads (Pure)

• The global explosion of eukaryotic algae: the potential role of phosphorus?

  Eckford-Soper, L. & Canfield, D. E., 7. Oct 2020, In: P L o S One. 15, 10, 28 p., e0234372.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • explosion
  • alga
  • phosphorus
  • dissolved inorganic phosphorus
  • cyanobacterium
  40 Downloads (Pure)

• The Hypoxic Proteome and Metabolome of Barley (Hordeum vulgare L.) with and without Phytoglobin Priming

  Andrzejczak, O. A., Havelund, J. F., Wang, W-Q., Kovalchuk, S., Hagensen, C. E., Hasler-Sheetal, H., Jensen, O. N., Rogowska-Wrzesinska, A., Møller, I. M. & Hebelstrup, K. H., 24. Feb 2020, In: International Journal of Molecular Sciences . 21, 4

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • proteome
  • barley
  • priming
  • Hordeum
  • hypoxia
  66 Downloads (Pure)

• The issues with tissues: the wide range of cell fate separation enables the evolution of multicellularity and cancer

  Hammarlund, E. U., Amend, S. R. & Pienta, K. J., 2020, In: Medical Oncology. 37, 7, 12 p., 62.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • Cell Separation
  • Physiological Adaptation
  • Animals
  • Asexual Reproduction
  • Neoplasms
  16 Downloads (Pure)

• The modern phosphorus cycle informs interpretations of Mesoproterozoic Era phosphorus dynamics

  Canfield, D. E., Bjerrum, C. J., Zhang, S., Wang, H. & Wang, X., Sep 2020, In: Earth-Science Reviews. 208, 103267.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • phosphorus cycle
  • phosphorus
  • oxygen
  • organic carbon
  • Redfield ratio

• The VIMOA project and archaeological heritage in the Nuussuaq Peninsula of north-west Greenland

  Walsh, M. J., Tejsner, P., Carlson, D. F., Vergeynst, L., Kjeldsen, K. U., Gründger, F., Dai, H., Thomsen, S. & Laursen, E., Feb 2020, In: Antiquity. 94, 373, 7 p., e6.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Greenland
  • Archaeological Survey
  • Degradation
  • Repository
  • Archaeological Record

• Tracking the evolution of seawater Mo isotopes through the Ediacaran–Cambrian transition

  Ye, Y., Wang, H., Wang, X., Zhai, L., Wu, C., Canfield, D. E. & Zhang, S., Nov 2020, In: Precambrian Research. 350, 11 p., 105929.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Seawater
  • Isotopes
  • Oxygenation
  • oxygenation
  • isotope

• Uncovering diversity and metabolic spectrum of animals in dead zone sediments

  Broman, E., Bonaglia, S., Holovachov, O., Marzocchi, U., Hall, P. O. J. & Nascimento, F. J. A., 2020, In: Communications Biology. 3, 1, 12 p., 106.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • animal
  • oxygen
  • sediment
  • resting stage
  • dormancy
  88 Downloads (Pure)

• Using cyclostratigraphic evidence to define the unconformity caused by the Mesoproterozoic Qinyu Uplift in the North China Craton

  Lyu, D., Deng, Y., Wang, H., Zhang, F., Ren, R., Gao, Z., Zhou, C., Luo, Z., Wang, X., Bi, L., Zhang, S. & Canfield, D. E., Feb 2021, In: Journal of Asian Earth Sciences. 206, 14 p., 104608.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • unconformity
  • craton
  • uplift
  • bentonite
  • Milankovitch cycle

• Very few sites can reshape the inferred phylogenetic tree

  Francis, W. R. & Canfield, D. E., 2020, In: PeerJ. 8, 15 p., e8865.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • Genes
  • phylogeny
  • Phylogeny
  • topology
  • Animals
  17 Downloads (Pure)
• 2019

  Anammox and partial nitritation in the mainstream of a wastewater treatment plant in a temperate region (Denmark)

  Kamp, A., Ottosen, L. D. M., Thøgersen, N. B., Revsbech, N. P., Thamdrup, B. & Andersen, M. H., 1. Apr 2019, In: Water Science and Technology. 79, 7, p. 1397-1405

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • Nitrification
  • Wastewater treatment
  • wastewater treatment plant
  • denitrification
  • nitrification
  202 Downloads (Pure)

• A New Frontier for Palaeobiology: Earth's Vast Deep Biosphere

  McMahon, S. & Ivarsson, M., Aug 2019, In: BioEssays. 41, 8, 11 p., 1900052.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • Ecosystem
  • Earth (planet)
  • Microanalysis
  • Sediments
  • Mars
  64 Downloads (Pure)

• Assessing plant-available glyphosate in contrasting soils by diffusive gradient in thin-films technique (DGT)

  Weng, Z., Rose, M. T., Tavakkoli, E., Van Zwieten, L., Styles, G., Bennett, W. & Lombi, E., 1. Jan 2019, In: Science of the Total Environment. 646, p. 735-744

  Research output: Contribution to journal › Journal article › Research › peer-review

  • glyphosate
  • Thin films
  • Soils
  • soil
  • Biological Availability

• Authigenic Mineral Texture in Submarine 1979 Basalt Drill Core, Surtsey Volcano, Iceland

  Jackson, M. D., Couper, S., Stan, C. V., Ivarsson, M., Czabaj, M. W., Tamura, N., Parkinson, D., Miyagi, L. M. & Moore, J. G., 31. Jul 2019, In: Geochemistry, Geophysics, Geosystems. 20, 7, p. 3751-3773 23 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • basalt
  • Iceland
  • Volcanoes
  • volcanoes
  • authigenic mineral
  66 Downloads (Pure)

• Baltic Methanosarcina and Clostridium compete for electrons from metallic iron

  Palacios Jaramillo, P. A., Snoeyenbos-West, O., Löscher, C., Thamdrup, B. & Rotaru, A-E., 25. Jan 2019, In: BioRxiv. 530386.

  Research output: Contribution to journal › Journal article › Research

  File

  • Clostridium
  • corrosion
  • iron
  • acetates
  • methane
  143 Downloads (Pure)

• Behavioural patterns of the soft-shell clam Mya arenaria: Implications for benthic oxygen and nitrogen dynamics

  Camillini, N., Larsen, M. & Glud, R. N., 2019, In: Marine Ecology Progress Series. 622, p. 103-119 17 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • Mya arenaria
  • shell (molluscs)
  • sediments
  • shell
  • clams
  78 Downloads (Pure)

• Benthic Oxygen and Nitrogen Exchange on a Cold-Water Coral Reef in the North-East Atlantic Ocean

  de Froe, E., Rovelli, L., Glud, R. N., Maier, S. R., Duineveld, G., Mienis, F., Lavaleye, M. & van Oevelen, D., 25. Oct 2019, In: Frontiers in Marine Science. 6, 13 p., 665.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

  • Reefs
  • dissolved inorganic nitrogen
  • Atlantic Ocean
  • coral reefs
  • cold water
  133 Downloads (Pure)