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  • Mads Thomassen
2016

Breast cancer risk variants at 6q25 display different phenotype associations and regulate ESR1, RMND1 and CCDC170

Dunning, A. M., Michailidou, K., Kuchenbaecker, K. B., Thompson, D. J., French, J. D., Beesley, J., Healey, C. S., Kar, S., Pooley, K. A., Lopez-Knowles, E., Dicks, E., Barrowdale, D., Sinnott-Armstrong, N. A., Sallari, R. C., Hillman, K. M., Kaufmann, S., Sivakumaran, H., Moradi Marjaneh, M., Lee, J. S., Hills, M. & 31 others, Jarosz, M., Drury, S., Canisius, S., Bolla, M. K., Dennis, J., Wang, Q., Hopper, J. L., Southey, M. C., Broeks, A., Schmidt, M. K., Lophatananon, A., Muir, K., Beckmann, M. W., Fasching, P. A., Dos Santos Silva, I., Peto, J., Sawyer, E. J., Tomlinson, I., Burwinkel, B., Marme, F., Guénel, P., Truong, T., Bojesen, S. E., Flyger, H., González-Neira, A., Perez, J. I. A., Shen, C-Y., Hansen, T. V. O., Bojesen, A., Thomassen, M. & EMBRACE, 2016, In : Nature Genetics. 48, 4, p. 374-386

Research output: Contribution to journalJournal articleResearchpeer-review

The Subclonal Structure and Genomic Evolution of Oral Squamous Cell Carcinoma Revealed by Ultra-deep Sequencing

Tabatabaeifar, S., Thomassen, M., Larsen, M. J., Larsen, S. R., Kruse, T. A. & Sørensen, J. A., 3. Jun 2016.

Research output: Contribution to conference without publisher/journalConference abstract for conferenceCommunication

Open Access
2017

The OncoArray Consortium: A Network for Understanding the Genetic Architecture of Common Cancers

Amos, C. I., Dennis, J., Wang, Z., Byun, J., Schumacher, F. R., Gayther, S. A., Casey, G., Hunter, D. J., Sellers, T. A., Gruber, S. B., Dunning, A. M., Michailidou, K., Fachal, L., Doheny, K. F., Spurdle, A. B., Li, Y., Xiao, X., Romm, J., Pugh, E., Coetzee, G. A. & 73 others, Hazelett, D. J., Bojesen, S. E., Caga-Anan, C., Haiman, C. A., Kamal, A., Luccarini, C., Tessier, D., Vincent, D., Bacot, F., Van Den Berg, DJ., Nelson, S., Demetriades, S., Goldgar, D. E., Couch, F. J., Forman, J. L., Giles, G., Conti, D. V., Bickeböller, H., Risch, A., Waldenberger, M., Brüske-Hohlfeld, I., Hicks, B. D., Ling, H., McGuffog, L., Lee, A., Kuchenbaecker, K., Soucy, P., Manz, J., Cunningham, J. M., Butterbach, K., Kote-Jarai, Z., Kraft, P., FitzGerald, L., Lindström, S., Adams, M., McKay, J. D., Phelan, C. M., Benlloch, S., Kelemen, L. E., Brennan, P., Riggan, M., O'Mara, T. A., Shen, H., Shi, Y., Thompson, D. J., Goodman, M. T., Nielsen, S. F., Berchuck, A., Laboissiere, S., Schmit, S. L., Shelford, T., Edlund, C. K., Taylor, J. A., Field, J. K., Park, S. K., Offit, K., Thomassen, M., Schmutzler, R., Ottini, L., Hung, R. J., Marchini, J., Amin Al Olama, A., Peters, U., Eeles, R. A., Seldin, M. F., Gillanders, E., Seminara, D., Antoniou, A. C., Pharoah, P. D. P., Chenevix-Trench, G., Chanock, S. J., Simard, J. & Easton, D. F., Jan 2017, In : Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology. 26, 1, p. 126-135

Research output: Contribution to journalJournal articleResearchpeer-review

The impact of interferon-alpha2 on HLA genes in patients with polycythemia vera and related neoplasms

Skov, V., Riley, C. H., Thomassen, M., Kjær, L., Stauffer Larsen, T., Bjerrum, O. W., Kruse, T. A. & Hasselbalch, H. C., Aug 2017, In : Leukemia and Lymphoma. 58, 8, p. 1914-1921

Research output: Contribution to journalJournal articleResearchpeer-review

2016

Evidence of non-canonical NOTCH signaling: Delta-like 1 homolog (DLK1) directly interacts with the NOTCH1 receptor in mammals

Traustadóttir, G. Á., Jensen, C. H., Thomassen, M., Beck, H. C., Mortensen, S. B., Laborda, J., Baladrón, V., Sheikh, S. P. & Andersen, D. C., 11. Jan 2016, In : Cellular Signalling. 28, 4, p. 246–254

Research output: Contribution to journalJournal articleResearchpeer-review

Strategies for Integrated Analysis of Genetic, Epigenetic, and Gene Expression Variation in Cancer: Addressing the Challenges

Thingholm, L. B., Andersen, L., Makalic, E., Southey, M. C., Thomassen, M. & Hansen, L. L., 2016, In : Frontiers in Genetics. 7, 2, 13 p., 2.

Research output: Contribution to journalReviewResearchpeer-review

Open Access
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145 Downloads (Pure)

No clinical utility of KRAS variant rs61764370 for ovarian or breast cancer

Ovarian Cancer Association Consortium, Breast Cancer Association Consortium, and Consortium of Modifiers of BRCA1 and BRCA2, Australian Ovarian Cancer Study Group, Breast Cancer Family Register, EMBRACE, GEMO Study Collaborators, GENICA Network, HEBON, kConFab Investigators & SWE-BRCA, 2016, In : Gynecologic Oncology. 141, 2, p. 386-401

Research output: Contribution to journalReviewResearchpeer-review

Shift of microRNA profile upon orthotopic xenografting of glioblastoma spheroid cultures

Halle, B., Thomassen, M., Venkatesan, R., Kaimal, V., Marcusson, E. G., Munthe, S., Sørensen, M. D., Aaberg-Jessen, C., Jensen, S. S., Meyer, M., Kruse, T. A., Christiansen, H., Schmidt, S., Mollenhauer, J., Schulz, M. K., Andersen, C. & Kristensen, B. W., 11. Apr 2016, In : Journal of Neuro-Oncology. 128, 3, p. 395–404

Research output: Contribution to journalJournal articleResearchpeer-review

2017

Clinical outcomes of female breast cancer according to BRCA mutation status

Cronin-Fenton, D. P., Kjaersgaard, A., Norgaard, M., Pedersen, I. S., Thomassen, M., Kaye, J. A., Gutierrez, L., Telford, C., Lewis, J., Tyczynski, J. E. & Sorensen, H. T., Aug 2017, In : Cancer Epidemiology. 49, p. 128-137

Research output: Contribution to journalJournal articleResearchpeer-review

2019

The FANCM:p.Arg658* truncating variant is associated with risk of triple-negative breast cancer

Bojesen, S. E., Flyger, H., Nielsen, F. C., Rossing, M. & ABCTB Investigators, Nov 2019, In : n p j Breast Cancer. 5, 14 p., 38.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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48 Downloads (Pure)

The Optimal Sequencing Depth of Tumor Biopsies for Identifying Clonal Cell Populations

Tabatabaeifar, S., Larsen, M. J., Thomassen, M., Larsen, S. R., Kruse, T. A. & Sørensen, J. A., 1. Sep 2019, In : Journal of Molecular Diagnostics. 21, 5, p. 790-795

Research output: Contribution to journalJournal articleResearchpeer-review

2018

Publisher Correction: Epigenetic changes in myelofibrosis: Distinct methylation changes in the myeloid compartments and in cases with ASXL1 mutations (Scientific Reports, (2017), 7, 1, (6774), 10.1038/s41598-017-07057-3)

Nielsen, H. M., Andersen, C. L., Westman, M., Kristensen, L. S., Asmar, F., Kruse, T. A., Thomassen, M., Larsen, T. S., Skov, V., Hansen, L. L., Bjerrum, O. W., Hasselbalch, H. C., Punj, V. & Grønbæk, K., 20. Nov 2018, In : Scientific Reports. 8, 1 p., 17311.

Research output: Contribution to journalComment/debateResearchpeer-review

Open Access
File
70 Downloads (Pure)
2019

Shared heritability and functional enrichment across six solid cancers

Jiang, X., Finucane, H. K., Schumacher, F. R., Schmit, S. L., Tyrer, J. P., Han, Y., Michailidou, K., Lesseur, C., Kuchenbaecker, K. B., Dennis, J., Conti, D. V., Casey, G., Gaudet, M. M., Huyghe, J. R., Albanes, D., Aldrich, M. C., Andrew, A. S., Andrulis, I. L., Anton-Culver, H., Antoniou, A. C. & 313 others, Antonenkova, N. N., Arnold, S. M., Aronson, K. J., Arun, B. K., Bandera, E. V., Barkardottir, R. B., Barnes, D. R., Batra, J., Beckmann, M. W., Benitez, J., Benlloch, S., Berchuck, A., Berndt, S. I., Bickeböller, H., Bien, S. A., Blomqvist, C., Boccia, S., Bogdanova, N. V., Bojesen, S. E., Bolla, M. K., Brauch, H., Brenner, H., Brenton, J. D., Brook, M. N., Brunet, J., Brunnström, H., Buchanan, D. D., Burwinkel, B., Butzow, R., Cadoni, G., Caldés, T., Caligo, M. A., Campbell, I., Campbell, P. T., Cancel-Tassin, G., Cannon-Albright, L., Campa, D., Caporaso, N., Carvalho, A. L., Chan, A. T., Chang-Claude, J., Chanock, S. J., Chen, C., Christiani, D. C., Claes, K. B. M., Claessens, F., Clements, J., Collée, J. M., Correa, M. C., Couch, F. J., Cox, A., Cunningham, J. M., Cybulski, C., Czene, K., Daly, M. B., deFazio, A., Devilee, P., Diez, O., Gago-Dominguez, M., Donovan, J. L., Dörk, T., Duell, E. J., Dunning, A. M., Dwek, M., Eccles, D. M., Edlund, C. K., Edwards, D. R. V., Ellberg, C., Evans, D. G., Fasching, P. A., Ferris, R. L., Liloglou, T., Figueiredo, J. C., Fletcher, O., Fortner, R. T., Fostira, F., Franceschi, S., Friedman, E., Gallinger, S. J., Ganz, P. A., Garber, J., García-Sáenz, J. A., Gayther, S. A., Giles, G. G., Godwin, A. K., Goldberg, M. S., Goldgar, D. E., Goode, E. L., Goodman, M. T., Goodman, G., Grankvist, K., Greene, M. H., Gronberg, H., Gronwald, J., Guénel, P., Håkansson, N., Hall, P., Hamann, U., Hamdy, F. C., Hamilton, R. J., Hampe, J., Haugen, A., Heitz, F., Herrero, R., Hillemanns, P., Hoffmeister, M., Høgdall, E., Hong, Y-C., Hopper, J. L., Houlston, R., Hulick, P. J., Hunter, D. J., Huntsman, D. G., Idos, G., Imyanitov, E. N., Ingles, S. A., Isaacs, C., Jakubowska, A., James, P., Jenkins, M. A., Johansson, M., Johansson, M., John, E. M., Joshi, A. D., Kaneva, R., Karlan, B. Y., Kelemen, L. E., Kühl, T., Khaw, K-T., Khusnutdinova, E., Kibel, A. S., Kiemeney, L. A., Kim, J., Kjaer, S. K., Knight, J. A., Kogevinas, M., Kote-Jarai, Z., Koutros, S., Kristensen, V. N., Kupryjanczyk, J., Lacko, M., Lam, S., Lambrechts, D., Landi, M. T., Lazarus, P., Le, N. D., Lee, E., Lejbkowicz, F., Lenz, H-J., Leslie, G., Lessel, D., Lester, J., Levine, D. A., Li, L., Li, C. I., Lindblom, A., Lindor, N. M., Liu, G., Loupakis, F., Lubiński, J., Maehle, L., Maier, C., Mannermaa, A., Marchand, L. L., Margolin, S., May, T., McGuffog, L., Meindl, A., Middha, P., Miller, A., Milne, R. L., MacInnis, R. J., Modugno, F., Montagna, M., Moreno, V., Moysich, K. B., Mucci, L., Muir, K., Mulligan, A. M., Nathanson, K. L., Neal, D. E., Ness, A. R., Neuhausen, S. L., Nevanlinna, H., Newcomb, P. A., Newcomb, L. F., Nielsen, F. C., Nikitina-Zake, L., Nordestgaard, B. G., Nussbaum, R. L., Offit, K., Olah, E., Olama, A. A. A., Olopade, O. I., Olshan, A. F., Olsson, H., Osorio, A., Pandha, H., Park, J. Y., Pashayan, N., Parsons, M. T., Pejovic, T., Penney, K. L., Peters, W. H. M., Phelan, C. M., Phipps, A. I., Plaseska-Karanfilska, D., Pring, M., Prokofyeva, D., Radice, P., Stefansson, K., Ramus, S. J., Raskin, L., Rennert, G., Rennert, H. S., van Rensburg, E. J., Riggan, M. J., Risch, H. A., Risch, A., Roobol, M. J., Rosenstein, B. S., Rossing, M. A., De Ruyck, K., Saloustros, E., Sandler, D. P., Sawyer, E. J., Schabath, M. B., Schleutker, J., Schmidt, M. K., Setiawan, V. W., Shen, H., Siegel, E. M., Sieh, W., Singer, C. F., Slattery, M. L., Sorensen, K. D., Southey, M. C., Spurdle, A. B., Stanford, J. L., Stevens, V. L., Stintzing, S., Stone, J., Sundfeldt, K., Sutphen, R., Swerdlow, A. J., Tajara, E. H., Tangen, C. M., Tardon, A., Taylor, J. A., Teare, M. D., Teixeira, M. R., Terry, M. B., Terry, K. L., Thibodeau, S. N., Thomassen, M., Bjørge, L., Tischkowitz, M., Toland, A. E., Torres, D., Townsend, P. A., Travis, R. C., Tung, N., Tworoger, S. S., Ulrich, C. M., Usmani, N., Vachon, C. M., Van Nieuwenhuysen, E., Vega, A., Aguado-Barrera, M. E., Wang, Q., Webb, P. M., Weinberg, C. R., Weinstein, S., Weissler, M. C., Weitzel, J. N., West, C. M. L., White, E., Whittemore, A. S., Wichmann, H-E., Wiklund, F., Winqvist, R., Wolk, A., Woll, P., Woods, M., Wu, A. H., Wu, X., Yannoukakos, D., Zheng, W., Zienolddiny, S., Ziogas, A., Zorn, K. K., Lane, J. M., Saxena, R., Thomas, D., Hung, R. J., Diergaarde, B., McKay, J., Peters, U., Hsu, L., García-Closas, M., Eeles, R. A., Chenevix-Trench, G., Brennan, P. J., Haiman, C. A., Simard, J., Easton, D. F., Gruber, S. B., Pharoah, P. D. P., Price, A. L., Pasaniuc, B., Amos, C. I., Kraft, P. & Lindström, S., 25. Jan 2019, In : Nature Communications. 10, 1, p. 1-23 431.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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140 Downloads (Pure)

Genomic Profiling of a Phase III Clinical Trial of Interferon Versus Hydroxyurea in MPN Patients Reveals Mutation-Specific and Treatment-Specific Patterns of Response

Knudsen, T. A., Skov, V., Werner, L., Duke, W., Gibson, C. J., Nag, A., Thorner, A. R., Wollison, B., Lund Hansen, D., Larsen, T. S., Ellervik, C., El Fassi, D., de Stricker, K., Ocias, L. F., Brabrand, M., Weiss Bjerrum, O., Overgaard, U. M., Frederiksen, M., Kielsgaard Kristensen, T., Kruse, T. A. & 11 others, Thomassen, M., Mourits-Andersen, H. T., Severinsen, M. T., Jesper, S., Starklint, J., Møller, P., Neuberg, D. S., Kjær, L., Hasselbalch, H. C., Coleman Lindsley, R. & Mullally, A., 13. Nov 2019, In : Blood. 134, Supplement 1, 4202.

Research output: Contribution to journalConference abstract in journalResearchpeer-review

Significantly Upregulated Thrombo-Inflammatory Genes Are Normoregulated or Significantly Downregulated during Treatment with Interferon-Alpha2 in Patients with Philadelphia-Negative Chronic Myeloproliferative Neoplasms

Skov, V., Riley, C. H., Thomassen, M., Kjær, L., Larsen, T. S., Kruse, T. A. & Hasselbalch, H. C., 8. Dec 2019.

Research output: Contribution to conference without publisher/journalPosterResearchpeer-review

Whole blood gene expression profiling in patients undergoing colon cancer surgery identifies differential expression of genes involved in immune surveillance, inflammation and carcinogenesis

Watt, S. K., Hasselbalch, H. C., Skov, V., Kjær, L., Thomassen, M., Kruse, T. A., Burton, M. & Gögenur, I., Feb 2019, In : European Journal of Surgical Oncology. 45, 2, PE3.

Research output: Contribution to journalConference abstract in journalResearchpeer-review

Ruxolitinib and interferon-α2 combination therapy for patients with polycythemia vera or myelofibrosis: a phase II study

Sørensen, A. L., Mikkelsen, S. U., Knudsen, T. A., Bjørn, M. E., Andersen, C. L., Bjerrum, O. W., Brochmann, N., Patel, D. A., Gjerdrum, L. M. R., El Fassi, D., Kruse, T. A., Larsen, T. S., Mourits-Andersen, H. T., Nielsen, C. H., Ellervik, C., Pallisgaard, N., Thomassen, M., Kjær, L., Skov, V. & Hasselbalch, H. C., 26. Dec 2019, In : Haematologica.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
2016

X-Linked and Autosomal Recessive Alport Syndrome: Pathogenic Variant Features and Further Genotype-Phenotype Correlations

Savige, J., Storey, H., Il Cheong, H., Gyung Kang, H., Park, E., Hilbert, P., Persikov, A., Torres-Fernandez, C., Ars, E., Torra, R., Hertz, J. M., Thomassen, M., Shagam, L., Wang, D., Wang, Y., Flinter, F. & Nagel, M., 2016, In : P L o S One. 11, 9, 13 p., e0161802.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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185 Downloads (Pure)
2018

Lecocytes mutation load declines with age in carriers of the m.3243A>G mutation: A 10-year Prospective Cohort

Langdahl, J. H., Larsen, M., Frost, M., Andersen, P. H., Yderstraede, K. B., Vissing, J., Dunø, M., Thomassen, M. & Frederiksen, A. L., Apr 2018, In : Clinical Genetics. 93, 4, p. 925-928

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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101 Downloads (Pure)
2019

FDG-PET/CT for Response Monitoring in Metastatic Breast Cancer: Today, Tomorrow, and Beyond

Centre for Personalized Response Monitoring in Oncology (PREMIO), 15. Aug 2019, In : Cancers . 11, 8, 13 p., 1190.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
74 Downloads (Pure)

Global expression profiling of cognitive level and decline in middle-aged monozygotic twins

Nygaard, M., Larsen, M. J., Thomassen, M., McGue, M., Christensen, K., Tan, Q. & Christiansen, L., Dec 2019, In : Neurobiology of Aging. 84, p. 141-147

Research output: Contribution to journalJournal articleResearchpeer-review

2016

Identification of four novel susceptibility loci for oestrogen receptor negative breast cancer

Couch, F. J., Kuchenbaecker, K. B., Michailidou, K., Mendoza-Fandino, G. A., Nord, S., Lilyquist, J., Olswold, C., Hallberg, E., Agata, S., Ahsan, H., Aittomäki, K., Ambrosone, C., Andrulis, I. L., Anton-Culver, H., Arndt, V., Arun, B. K., Arver, B., Barile, M., Barkardottir, R. B., Barrowdale, D. & 229 others, Beckmann, L., Beckmann, M. W., Benítez, J., Blank, S. V., Blomqvist, C., Bogdanova, N. V., Bojesen, S. E., Bolla, M. K., Bonanni, B., Brauch, H., Brenner, H., Burwinkel, B., Buys, S., Caldes, T., Caligo, M. A., Canzian, F., Carpenter, J., Chang-Claude, J., Chanock, S. J., Chung, W. K., Claes, K. B. M., Cox, A., Cross, S. S., Cunningham, J. M., Czene, K., Daly, M. B., Damiola, F., Darabi, H., de la Hoya, M., Devilee, P., Díez, O., Ding, Y. C., Dolcetti, R., Domchek, S. M., Dorfling, C. M., Dos Santos Silva, I., Dumont, M., Dunning, A. M., Eccles, D. M., Ehrencrona, H., Ekici, A. B., Eliassen, H., Ellis, S., Fasching, P. A., Figueroa, J., Flesch-Janys, D., Försti, A., Fostira, F., Foulkes, W. D., Friebel, T. M., Friedman, E., Frost, D., Gabrielson, M., Gammon, M. D., Ganz, P. A., Gapstur, S. M., Garber, J., Gaudet, M., Gayther, S. A., Gerdes, A-M., Ghoussaini, M., Giles, G., Glendon, G., Godwin, A. K., Goldberg, M. S., Goldgar, D. E., González-Neira, A., Greene, M. H., Gronwald, J., Guénel, P., Gunter, M. J., Haeberle, L., Haiman, C. A., Hamann, U., Hansen, T. V. O., Hart, S., Healey, S., Heikkinen, T., Henderson, B. E., Herzog, J., Hogervorst, F. B. L., Hollestelle, A., Hooning, M. J., Hoover, R. N., Hopper, J. L., Humphreys, K., Hunter, D. J., Huzarski, T., Imyanitov, E. N., Isaacs, C., Jakubowska, A., James, P. A., Janavicius, R., Jensen, U. B., John, E. M., Jones, M., Kabisch, M., Kar, S., Karlan, B. Y., Khan, S., Khaw, K-T., Kibriya, M. G., Knight, J. A., Ko, Y-D., Konstantopoulou, I., Kosma, V-M., Kristensen, V., Kwong, A., Laitman, Y., Lambrechts, D., Lázaro, C., Lee, E., Le Marchand, L., Lester, J., Lindblom, A., Lindor, N., Lindstrom, S., Liu, J., Long, J., Lubinski, J., Mai, P. L., Makalic, E., Malone, K. E., Mannermaa, A., Manoukian, S., Margolin, S., Marme, F., Martens, J. W. M., McGuffog, L., Meindl, A., Miller, A., Milne, R. L., Miron, P., Montagna, M., Mazoyer, S., Mulligan, A. M., Muranen, T. A., Nathanson, K. L., Neuhausen, S. L., Nevanlinna, H., Nordestgaard, B. G., Nussbaum, R. L., Offit, K., Olah, E., Olopade, O. I., Olson, J. E., Osorio, A., Park, S. K., Peeters, P. H. M., Peissel, B., Peterlongo, P., Peto, J., Phelan, C. M., Pilarski, R., Poppe, B., Pylkäs, K., Radice, P., Rahman, N., Rantala, J., Rappaport, C., Rennert, G., Richardson, A., Robson, M., Romieu, I., Rudolph, A., Rutgers, E. J., Sánchez, M-J., Santella, R. M., Sawyer, E. J., Schmidt, D. F., Schmidt, M. K., Schmutzler, R. K., Schumacher, F., Scott, R. J., Senter, L., Sharma, P., Simard, J., Singer, C. F., Sinilnikova, O. M., Soucy, P., Southey, M., Steinemann, D., Stenmark Askmalm, M., Stoppa-Lyonnet, D., Swerdlow, A., Szabo, C. I., Tamimi, R., Tapper, W., Teixeira, M. R., Teo, S-H., Terry, M. B., Thomassen, M., Thompson, D. J., Tihomirova, L., Toland, A. E., Tollenaar, R. A. E. M., Tomlinson, I., Truong, T., Tsimiklis, H., Teulé, A., Tumino, R., Tung, N., Turnbull, C., Ursin, G., van Deurzen, C. H. M., van Rensburg, E. J., Varon-Mateeva, R., Wang, Z., Wang-Gohrke, S., Weiderpass, E., Weitzel, J. N., Whittemore, A. S., Wildiers, H., Winqvist, R., Yang, X. R., Yannoukakos, D., Yao, S., Zamora, M. P., Zheng, W., Hall, P., Kraft, P., Vachon, C., Slager, S., Chenevix-Trench, G., Pharoah, P. D. P., Monteiro, A. N. A., Garcia-Closas, M., Easton, D. F. & Antoniou, A. C., 2016, In : Nature Communications. 7, 13 p., 11375.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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2017

Investigating a case of possible field cancerization in oral squamous cell carcinoma by the use of next-generation sequencing

Tabatabaeifar, S., Larsen, M. J., Larsen, S. R., Kruse, T. A., Thomassen, M. & Sørensen, J. A., 2017, In : Oral Oncology. 68, p. 74-80

Research output: Contribution to journalJournal articleResearchpeer-review

The subclonal structure and genomic evolution of oral squamous cell carcinoma revealed by ultra-deep sequencing

Tabatabaeifar, S., Thomassen, M., Larsen, M. J., Larsen, S. R., Kruse, T. A. & Sørensen, J. A., 2017, In : OncoTarget. 8, 10, p. 16571-16580

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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Genomic analyses of breast cancer progression reveal distinct routes of metastasis emergence

Krøigård, A. B., Larsen, M. J., Brasch-Andersen, C., Lænkholm, A. V., Knoop, A. S., Jensen, J. D., Bak, M., Mollenhauer, J., Thomassen, M. & Kruse, T. A., 2017, In : Scientific Reports. 7, 9 p., 43813.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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177 Downloads (Pure)
2016

A 7-Gene Signature Depicts the Biochemical Profile of Early Prefibrotic Myelofibrosis

Skov, V., Burton, M., Thomassen, M., Stauffer Larsen, T., Riley, C. H., Brinch Madelung, A., Kjær, L., Bondo, H., Stamp, I., Ehinger, M., Dahl-Sørensen, R., Brochmann Mortensen, N., Nielsen, K., Thiele, J., Jensen, M. K., Weis Bjerrum, O., Kruse, T. A. & Hasselbalch, H. C., 2016, In : P L o S One. 11, 8, p. 1-15 e0161570.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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Identification of independent association signals and putative functional variants for breast cancer risk through fine-scale mapping of the 12p11 locus

Zeng, C., Guo, X., Long, J., Kuchenbaecker, K. B., Droit, A., Michailidou, K., Ghoussaini, M., Kar, S., Freeman, A., Hopper, J. L., Milne, R. L., Bolla, M. K., Wang, Q., Dennis, J., Agata, S., Ahmed, S., Aittomäki, K., Andrulis, I. L., Anton-Culver, H., Antonenkova, N. N. & 31 others, Arason, A., Arndt, V., Arun, B. K., Arver, B., Bacot, F., Barrowdale, D., Baynes, C., Beeghly-Fadiel, A., Benítez, J., Bermisheva, M., Blomqvist, C., Blot, W. J., Bogdanova, N. V., Bojesen, S. E., Bonanni, B., Borresen-Dale, A-L., Brand, J. S., Brauch, H., Brennan, P., Brenner, H., Broeks, A., Brüning, T., Burwinkel, B., Buys, S., Cai, Q., Caldes, T., Campbell, I., Hansen, T. V. O., Shen, C-Y., Thomassen, M. & EMBRACE, 2016, In : Breast Cancer Research (Online). 18, 64, 21 p., 64.

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254 Downloads (Pure)
2019
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21 Downloads (Pure)
2018

Genomic profiling of tumors from patients with germline BRCA mutations

Lænkholm, A. V., Sønderstrup, I. M. H., Jensen, M. B., Eriksen, J. O., Thomassen, M., Gerdes, A-M., Rossing, M., Brauer, H. A., Mashadi-Hossein, A., Ferree, S. & Ejlertsen, B., 2018, In : Journal of Clinical Oncology. 36, 15 Suppl, p. 1533

Research output: Contribution to journalConference abstract in journalResearchpeer-review

2019

MESP1 knock-down in human iPSC attenuates early vascular progenitor cell differentiation after completed primitive streak specification

Eskildsen, T. V., Ayoubi, S., Thomassen, M., Burton, M., Mandegar, M. A., Conklin, B. R., Jensen, C. H., Andersen, D. C. & Sheikh, S. P., Jan 2019, In : Developmental Biology. 445, 1, p. 1-7

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2018

Whole Blood Gene Expression Profiling in patients undergoing colon cancer surgery identifies differential expression of genes involved in immune surveillance, inflammation and carcinogenesis

Watt, S. K., Hasselbalch, H. C., Skov, V., Kjær, L., Thomassen, M., Kruse, T. A., Burton, M. & Gögenur, I., Jun 2018, In : Surgical Oncology. 27, 2, p. 208-215

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Mutational Spectrum in a Worldwide Study of 29,700 Families with BRCA1 or BRCA2 Mutations

Rebbeck, T. R., Friebel, T. M., Friedman, E., Hamann, U., Huo, D., Kwong, A., Olah, E., Olopade, O. I., Solano, A. R., Teo, S-H., Thomassen, M., Weitzel, J. N., Chan, T. L., Couch, F. J., Goldgar, D. E., Kruse, T. A., Palmero, E. I., Park, S. K., Torres, D., van Rensburg, E. J. & 31 others, McGuffog, L., Parsons, M. T., Leslie, G., Aalfs, C. M., Abugattas, J., Adlard, J., Agata, S., Aittomäki, K., Andrews, L., Andrulis, I. L., Arason, A., Arnold, N., Arun, B. K., Asseryanis, E., Auerbach, L., Azzollini, J., Balmaña, J., Barile, M., Barkardottir, R. B., Barrowdale, D., Benitez, J., Berger, A., Berger, R., Blanco, A. M., Blazer, K. R., Blok, M. J., Bonadona, V., Gerdes, A-M., Nielsen, H. R., Skytte, A-B. & EMBRACE, May 2018, In : Human Mutation. 39, 5, p. 593-620

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The BRCA1 c. 5096G>A p.Arg1699Gln (R1699Q) intermediate risk variant: breast and ovarian cancer risk estimation and recommendations for clinical management from the ENIGMA consortium

Moghadasi, S., Meeks, H. D., Vreeswijk, M. P., Janssen, L. A., Borg, Å., Ehrencrona, H., Paulsson-Karlsson, Y., Wappenschmidt, B., Engel, C., Gehrig, A., Arnold, N., Hansen, T. V. O., Thomassen, M., Jensen, U. B., Kruse, T. A., Ejlertsen, B., Gerdes, A-M., Pedersen, I. S., Caputo, S. M., Couch, F. & 20 others, Hallberg, E. J., van den Ouweland, A. M., Collée, M. J., Teugels, E., Adank, M. A., van der Luijt, R. B., Mensenkamp, A. R., Oosterwijk, J. C., Blok, M. J., Janin, N., Claes, K. B., Tucker, K., Viassolo, V., Toland, A. E., Eccles, D. E., Devilee, P., Van Asperen, C. J., Spurdle, A. B., Goldgar, D. E. & Garcia, E. B. G., Jan 2018, In : Journal of Medical Genetics. 55, 1, p. 15-20

Research output: Contribution to journalLetterResearchpeer-review

2017

Differential DNA methylation patterns of polycystic ovarian syndrome in whole blood of Chinese women

Li, S., Zhu, D., Duan, H., Ren, A., Glintborg, D., Andersen, M., Skov, V., Thomassen, M., Kruse, T. & Tan, Q., 1. Jan 2017, In : Oncotarget. 8, 13, p. 20656-20666

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Association of breast cancer risk in BRCA1 and BRCA2 mutation carriers with genetic variants showing differential allelic expression: identification of a modifier of breast cancer risk at locus 11q22.3

Hamdi, Y., Soucy, P., Kuchenbaeker, K. B., Pastinen, T., Droit, A., Lemaçon, A., Adlard, J., Aittomäki, K., Andrulis, I. L., Arason, A., Arnold, N., Arun, B. K., Azzollini, J., Bane, A., Barjhoux, L., Barrowdale, D., Benítez, J., Berthet, P., Blok, M. J., Bobolis, K. A. & 31 others, Bonadona, V., Bonanni, B., Bradbury, A. R., Brewer, C., Buecher, B., Buys, S., Caligo, M. A., Chiquette, J., Chung, W. K., Claes, K. B. M., Daly, M. B., Damiola, F., Davidson, R., de la Hoya, M., De Leeneer, K., Díez, O., Ding, Y. C., Dolcetti, R., Domchek, S. M., Dorfling, C. M., Eccles, D., Eeles, R., Einbeigi, Z., Ejlertsen, B., Engel, C., Gareth Evans, D., Feliubadaló, L., Foretova, L., Gerdes, A-M., Thomassen, M. & EMBRACE, 2017, In : Breast Cancer Research and Treatment. 161, 1, p. 117-134

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2016

BRCA2 Polymorphic Stop Codon K3326X and the Risk of Breast, Prostate, and Ovarian Cancers

Meeks, H. D., Song, H., Michailidou, K., Bolla, M. K., Dennis, J., Wang, Q., Barrowdale, D., Frost, D., McGuffog, L., Ellis, S., Feng, B., Buys, S. S., Hopper, J. L., Southey, M. C., Tesoriero, A., James, P. A., Bruinsma, F., Campbell, I. G., Broeks, A., Schmidt, M. K. & 31 others, Hogervorst, F. B. L., Beckman, M. W., Fasching, P. A., Fletcher, O., Johnson, N., Sawyer, E. J., Riboli, E., Banerjee, S., Menon, U., Tomlinson, I., Burwinkel, B., Hamann, U., Marme, F., Rudolph, A., Janavicius, R., Tihomirova, L., Tung, N., Garber, J., Cramer, D., Terry, K. L., Poole, E. M., Tworoger, S. S., Dorfling, C. M., van Rensburg, E. J., Godwin, A. K., Guénel, P., Truong, T., Stoppa-Lyonnet, D., Gerdes, A-M., Thomassen, M. & EMBRACE, Feb 2016, In : Journal of the National Cancer Institute. 108, 2, 10 p., djv315 .

Research output: Contribution to journalJournal articleResearchpeer-review

2019

Molecular profiling reveals highly de-regulated insulin growth factor binding proteins in patients with myelofibrosis and related neoplasms

Skov, V., Thomassen, M., Kjær, L., Riley, C. H., Larsen, T. S., Weiss Bjerrum, O., Kruse, T. A. & Hasselbalch, H. C., 14. Jun 2019.

Research output: Contribution to conference without publisher/journalPosterResearchpeer-review

2016

Functional mechanisms underlying pleiotropic risk alleles at the 19p13.1 breast-ovarian cancer susceptibility locus

Lawrenson, K., Kar, S., McCue, K., Kuchenbaeker, K. B., Michailidou, K., Tyrer, J. P., Beesley, J., Ramus, S. J., Li, Q., Delgado, M. K., Lee, J. M., Aittomäki, K., Andrulis, I. L., Anton-Culver, H., Arndt, V., Arun, B. K., Arver, B., Bandera, E. V., Barile, M., Barkardottir, R. B. & 31 others, Barrowdale, D., Beckmann, M. W., Benítez, J., Berchuck, A., Bisogna, M., Bjorge, L., Blomqvist, C., Blot, W., Bogdanova, N. V., Bojesen, A., Bojesen, S. E., Bolla, M. K., Bonanni, B., Børresen-Dale, A-L., Brauch, H., Brennan, P., Brenner, H., Bruinsma, F., Brunet, J., Buhari, S. A., Burwinkel, B., Butzow, R., Buys, S., Cai, Q., Caldes, T., Campbell, I., Canniotto, R., Chang-Claude, J., Chiquette, J., Thomassen, M. & GEMO Study Collaborators, 2016, In : Nature Communications. 7, p. 1-22 12675.

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2017

Identification of 12 new susceptibility loci for different histotypes of epithelial ovarian cancer

Phelan, C. M., Kuchenbaecker, K. B., Tyrer, J. P., Kar, S. P., Lawrenson, K., Winham, S. J., Dennis, J., Pirie, A., Riggan, M. J., Chornokur, G., Earp, M. A., Lyra, P. C., Lee, J. M., Coetzee, S., Beesley, J., McGuffog, L., Soucy, P., Dicks, E., Lee, A., Barrowdale, D. & 31 others, Lecarpentier, J., Leslie, G., Aalfs, C. M., Aben, K. K. H., Adams, M., Adlard, J., Andrulis, I. L., Anton-Culver, H., Antonenkova, N. N., Aravantinos, G., Arnold, N., Arun, B. K., Arver, B., Azzollini, J., Balmaña, J., Banerjee, S. N., Barjhoux, L., Barkardottir, R. B., Bean, Y., Beckmann, M. W., Beeghly-Fadiel, A., Benitez, J., Bermisheva, M., Bernardini, M. Q., Birrer, M. J., Bjorge, L., Bojesen, A., Gerdes, A-M., Kruse, T. A., Thomassen, M. & AOCS study group, 2017, In : Nature Genetics. 49, 5, p. 680-691

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2019

CFP suppresses breast cancer cell growth by TES-mediated upregulation of the transcription factor DDIT3

Block, I., Müller, C., Sdogati, D., Pedersen, H., List, M., Jaskot, A. M., Syse, S. D., Lund Hansen, P., Schmidt, S., Christiansen, H., Casella, C., Bering Olsen, S., Blomstrøm, M. M., Riedel, A., Thomassen, M., Kruse, T. A., Karlskov Hansen, S. W., Kioschis, P. & Mollenhauer, J., 6. Jun 2019, In : Oncogene. 38, 23, p. 4560-4573

Research output: Contribution to journalJournal articleResearchpeer-review

2016

Male breast cancer in BRCA1 and BRCA2 mutation carriers: pathology data from the Consortium of Investigators of Modifiers of BRCA1/2

Silvestri, V., Barrowdale, D., Mulligan, A. M., Neuhausen, S. L., Fox, S., Karlan, B. Y., Mitchell, G., James, P. A., Thull, D. L., Zorn, K. K., Carter, N. J., Nathanson, K. L., Domchek, S. M., Rebbeck, T. R., Ramus, S. J., Nussbaum, R. L., Olopade, O. I., Rantala, J., Yoon, S-Y., Caligo, M. A. & 31 others, Spugnesi, L., Bojesen, A., Pedersen, I. S., Thomassen, M., Jensen, U. B., Toland, A. E., Senter, L., Andrulis, I. L., Glendon, G., Hulick, P. J., Imyanitov, E. N., Greene, M. H., Mai, P. L., Singer, C. F., Rappaport-Fuerhauser, C., Kramer, G., Vijai, J., Offit, K., Robson, M., Lincoln, A., Jacobs, L., Machackova, E., Foretova, L., Navratilova, M., Vasickova, P., Couch, F. J., Hallberg, E., Ruddy, K. J., Gerdes, A-M., Hansen, T. V. O. & kConFab Investigators, 2016, In : Breast Cancer Research (Online). 18, 15.

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2017

The gene expression and immunohistochemical time-course of diphenylcyclopropenone induced contact allergy in healthy humans following repeated epicutaneous challenges

Mose, K. F., Burton, M., Thomassen, M., Andersen, F., Kruse, T. A., Tan, Q., Skov, L., Almose Røpke, M., Litman, T., Clemmensen, O., Kristensen, B. W., S. Friedmann, P. & Andersen, K. E., Oct 2017, In : Experimental Dermatology. 26, 10, p. 926–933

Research output: Contribution to journalJournal articleResearchpeer-review

2016

Evaluation of Nine Somatic Variant Callers for Detection of Somatic Mutations in Exome and Targeted Deep Sequencing Data

Krøigård, A. B., Thomassen, M., Lænkholm, A. V., Kruse, T. A. & Larsen, M. J., 22. Mar 2016, In : P L o S One. 11, 3, p. 1-15 e0151664.

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BRCA1/BRCA2 founder mutations and cancer risks: impact in the western Danish population

Nielsen, H. R., Nilbert, M., Petersen, J., Ladelund, S., Thomassen, M., Pedersen, I. S., Hansen, T. V. O., Skytte, A-B., Borg, Å. & Therkildsen, C., 2016, In : Familial Cancer. 15, 4, p. 507-512

Research output: Contribution to journalJournal articleResearchpeer-review

2018

A Danish national effort of BRCA1/2 variant classification

Pedersen, I. S., Schmidt, A. Y., Bertelsen, B., Ernst, A., Andersen, C. L. T., Kruse, T., Rossing, M. & Thomassen, M., 2. Jan 2018, In : Acta Oncologica. 57, 1, p. 159-162

Research output: Contribution to journalComment/debateResearchpeer-review

Genetic testing and clinical management practices for variants in non-BRCA1/2 breast (and breast/ovarian) cancer susceptibility genes: An international survey by the Evidence-based Network for the Interpretation of Germline Mutant Alleles (ENIGMA) clinical working group

Nielsen, S. M., Eccles, D. M., Romero, I. L., Al-Mulla, F., Balmaña, J., Biancolella, M., Blok, R., Caligo, M. A., Calvello, M., Capone, G. L., Cavalli, P., Chan, T. L. C., Claes, K. B. M., Cortesi, L., Couch, F. J., de la Hoya, M., De Toffol, S., Diez, O., Domchek, S. M., Eeles, R. & 30 others, Efremidis, A., Fostira, F., Goldgar, D., Hadjisavvas, A., Hansen, T. V. O., Hirasawa, A., Houdayer, C., Kleiblova, P., Krieger, S., Lázaro, C., Loizidou, M., Manoukian, S., Mensenkamp, A. R., Moghadasi, S., Monteiro, A. N., Mori, L., Morrow, A., Naldi, N., Nielsen, H. R., Olopade, O. I., Pachter, N. S., Palmero, E. I., Pedersen, I. S., Piane, M., Puzzo, M., Robson, M., Rossing, M., Sini, M. C., Solano, A. & Thomassen, M., 2018, In : JCO Precision Oncology. 2

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Innate signaling in central nervous system recruits myeloid suppressor cells

Marczynska, J., Khorooshi, R. M., Dieu, R. S., Hansen, C. R., Kavan, S., Thomassen, M., Burton, M., Kruse, T., Webster, G. A. & Owens, T., 1. Oct 2018, In : Multiple Sclerosis Journal. 24, Suppl. 2, p. 184-185 2 p.

Research output: Contribution to journalConference abstract in journalResearchpeer-review

Molecular heterogeneity of mantle cell lymphoma

Cédile, O., Hansen, M. C., Ebbesen, L. H., Nørgaard Bentzen, H. H., Thomassen, M., Kruse, T. A., Kavan, S., Møller, M. B., Kielsgaard Kristensen, T., Christensen, J. H., Abildgaard, N. & Nyvold, C. G., 4. May 2018.

Research output: Contribution to conference without publisher/journalConference abstract for conferenceResearchpeer-review

Full in-frame exon 3 skipping of BRCA2 confers high risk of breast and/or ovarian cancer

French COVAR group collaborators, 3. Apr 2018, In : Oncotarget. 9, 25, p. 17334-17348

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2017

Prediction of Breast and Prostate Cancer Risks in Male BRCA1 and BRCA2 Mutation Carriers Using Polygenic Risk Scores

Lecarpentier, J., Silvestri, V., Kuchenbaecker, K. B., Barrowdale, D., Dennis, J., McGuffog, L., Soucy, P., Leslie, G., Rizzolo, P., Navazio, A. S., Valentini, V., Zelli, V., Lee, A., Amin Al Olama, A., Tyrer, J. P., Southey, M., John, E. M., Conner, T. A., Goldgar, D. E., Buys, S. & 31 others, Janavicius, R., Steele, L., Ding, Y. C., Neuhausen, S. L., Hansen, T. V. O., Osorio, A., Weitzel, J. N., Toss, A., Medici, V., Cortesi, L., Zanna, I., Palli, D., Radice, P., Manoukian, S., Peissel, B., Azzollini, J., Viel, A., Cini, G., Damante, G., Tommasi, S., Peterlongo, P., Fostira, F., Hamann, U., Evans, D. G., Bojesen, A., Nielsen, H. R., Skytte, A-B., Krogh, L., Kruse, T. A., Thomassen, M. & EMBRACE, 10. Jul 2017, In : Journal of Clinical Oncology. 35, 20, p. 2240-2250

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