16S rRNA gene sequencing in routine identification of anaerobic bacteria isolated from blood cultures

Ulrik Stenz Justesen, Marianne Nielsine Skov, Elisa Knudsen, Hanne Marie Holt, Per Søgaard, Tage Justesen

Research output: Contribution to journalJournal articleResearchpeer-review

Abstract

A comparison between conventional identification and 16S rRNA gene sequencing of anaerobic bacteria isolated from blood cultures in a routine setting was performed (n = 127). With sequencing, 89% were identified to the species level, versus 52% with conventional identification. The times for identification were 1.5 days and 2.8 days, respectively.
Original languageEnglish
JournalJournal of Clinical Microbiology
Volume48
Issue number3
Pages (from-to)946-8
Number of pages2
ISSN0095-1137
DOIs
Publication statusPublished - 1. Mar 2010

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