Research output per year
Research output per year
Fingerprint
Fingerprints are formed from scientific publications and create an index of weighted keyword concepts for each individual researcher.
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
Research output
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On the Realisability of Chemical Pathways
Andersen, J. L., Banke, S., Fagerberg, R., Flamm, C., Merkle, D. & Stadler, P. F., 2023, Bioinformatics Research and Applications - 19th International Symposium, ISBRA 2023, Proceedings. Guo, X., Mangul, S., Patterson, M. & Zelikovsky, A. (eds.). Springer Science+Business Media, p. 409-419 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 14248 LNBI).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Reconciling Inconsistent Molecular Structures from Biochemical Databases
Eriksen, C. A., Andersen, J. L., Fagerberg, R. & Merkle, D., 2023, Bioinformatics Research and Applications - 19th International Symposium, ISBRA 2023, Proceedings. Guo, X., Mangul, S., Patterson, M. & Zelikovsky, A. (eds.). Springer Science+Business Media, p. 58-71 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 14248 LNBI).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Generic Context-Aware Group Contributions
Flamm, C., Hellmuth, M., Merkle, D., Nojgaard, N. & Stadler, P. F., 2022, IEEE/ACM Transactions on Computational Biology and Bioinformatics. 1 ed. IEEE, Vol. 19. p. 429-442 (IEEE/ACM Transactions on Computational Biology and Bioinformatics).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
Open AccessFile26 Downloads (Pure) -
Representing catalytic mechanisms with rule composition
Andersen, J. L., Fagerberg, R., Flamm, C., Fontana, W., Kolčák, J., Laurent, C. V. F. P., Merkle, D. & Nøjgaard, N., 28. Nov 2022, In: Journal of Chemical Information and Modeling. 62, 22, p. 5513-5524Research output: Contribution to journal › Journal article › Research › peer-review
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Cayley Graphs of Semigroups Applied to Atom Tracking in Chemistry
Nøjgaard, N., Fontana, W., Hellmuth, M. & Merkle, D., Jul 2021, In: Journal of Computational Biology. 28, 7, p. 701-715Research output: Contribution to journal › Journal article › Research › peer-review
Activities
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Teaching Committee, IMADA (External organisation)
Daniel Merkle (Member)
2015 → …Activity: Membership › Membership of commitees, commissions, boards, councils, associations, organisations, or similar
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University of Southern Denmark (External organisation)
Daniel Merkle (Member)
2015 → …Activity: Membership › Membership of commitees, commissions, boards, councils, associations, organisations, or similar
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Dagstuhl Seminar - Algorithmic Cheminformatics
Daniel Merkle (Organizer)
2. Nov 2014 → 7. Nov 2014Activity: Attending an event › Conference organisation or participation
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COST Action CM1304 "Emergence and Evolution of Complex Chemical Systems" (External organisation)
Daniel Merkle (Member)
3. Dec 2013 → 2. Dec 2017Activity: Membership › Board duties in companies, associations, or public organisations
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COST Action TD1308: Origins and evolution of life on Earth and in the Universe (ORIGINS) (External organisation)
Daniel Merkle (Member)
2013 → 2017Activity: Membership › Board duties in companies, associations, or public organisations
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Novo Nordisk Fonden - MATOMIC - Mathematical Modelling for Microbial Community Induced Metabolic Diseases
01/01/2022 → 31/12/2027
Project: Research
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EU - Horizon Europe - TACsy - (Drift) Training Alliance for Computational Systems chemistry
01/03/2021 → 01/03/2027
Project: EU
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EU - Horizon Europe - TACsy - (PhD) Training Alliance for Computational Systems chemistry
01/03/2023 → 28/02/2027
Project: EU
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Novo Nordisk Fonden - From Category Theory to Enzyme Design: Unleashing the Potential of Computational Systems Chemistry
01/07/2020 → 30/06/2022
Project: Private Foundations
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EuOpstart - Big Data of Protocells: A Revolution in the Chemical Sciences
15/04/2021 → 08/06/2021
Project: Research
Press/Media
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PRM / Matematik skal afsløre, hvad der foregår i overvægtiges tarmsystem
28/07/2022
1 Media contribution
Press/Media: Press / Media
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Matematik skal afsløre, hvad der foregår i overvægtiges tarmsystem
28/07/2022
1 Media contribution
Press/Media: Press / Media
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PRM / Matematik skal afsløre, hvad der foregår i overvægtiges tarmsystem
28/07/2022
1 Media contribution
Press/Media: Press / Media
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Matematik skal afsløre, hvad der foregår i overvægtiges tarmsystem
27/07/2022
1 Media contribution
Press/Media: Press / Media
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Impacts
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PRM / Matematik skal afsløre, hvad der foregår i overvægtiges tarmsystem
Daniel Merkle (Participant)
Impact: Quality of life impact