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Research Output

2020

Generation of Aggregates of α-Lactalbumin by UV-B Light Exposure

Zhao, Z., Engholm-Keller, K., Poojary, M. M., Boelt, S. G., Rogowska-Wrzesinska, A., Skibsted, L. H., Davies, M. J. & Lund, M. N., 17. Jun 2020, In : Journal of Agricultural and Food Chemistry. 68, 24, p. 6701-6714

Research output: Contribution to journalJournal articleResearchpeer-review

Oxidant-induced glutathionylation at protein disulfide bonds

Carroll, L., Jiang, S., Irnstorfer, J., Beneyto, S., Ignasiak, M. T., Rasmussen, L. M., Rogowska-Wrzesinska, A. & Davies, M. J., 20. Nov 2020, In : Free Radical Biology and Medicine. 160, p. 513-525 13 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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The challenge of detecting modifications on proteins

Smith, L. E. & Rogowska-Wrzesinska, A., Feb 2020, In : Essays in Biochemistry. 64, 1, p. 135-153

Research output: Contribution to journalJournal articleResearchpeer-review

The effect of phytoglobin overexpression on the plant proteome during nonhost response of barley (Hordeum vulgare) to wheat powdery mildew (Blumeria graminis f. sp. tritici)

Andrzejczak, O. A., Sørensen, C. K., Wang, W-Q., Kovalchuk, S., Hagensen, C. E., Jensen, O. N., Carciofi, M., Hovmøller, M. S., Rogowska-Wrzesinska, A., Møller, I. M. & Hebelstrup, K. H., 8. Jun 2020, In : Scientific Reports. 10, 22 p., 9192.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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12 Downloads (Pure)

The Hypoxic Proteome and Metabolome of Barley (Hordeum vulgare L.) with and without Phytoglobin Priming

Andrzejczak, O. A., Havelund, J. F., Wang, W-Q., Kovalchuk, S., Hagensen, C. E., Hasler-Sheetal, H., Jensen, O. N., Rogowska-Wrzesinska, A., Møller, I. M. & Hebelstrup, K. H., 24. Feb 2020, In : International Journal of Molecular Sciences . 21, 4

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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51 Downloads (Pure)

Urinary proteome of newborn calves—new potential in non-invasive neonatal diagnostic

Dratwa-Chałupnik, A., Wojdyła, K., Ożgo, M., Lepczyński, A., Michałek, K., Herosimczyk, A. & Rogowska-Wrzesińska, A., Aug 2020, In : Animals. 10, 8, 19 p., 1257.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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4 Downloads (Pure)
2019

Analysis of protein chlorination by mass spectrometry

Nybo, T., Davies, M. J. & Rogowska-Wrzesinska, A., 1. Sep 2019, In : Redox Biology. 26, 10 p., 101236.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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128 Downloads (Pure)

Chlorination and oxidation of the extracellular matrix protein laminin and basement membrane extracts by hypochlorous acid and myeloperoxidase

Nybo, T., Dieterich, S., Gamon, L. F., Chuang, C. Y., Hammer, A., Hoefler, G., Malle, E., Rogowska-Wrzesinska, A. & Davies, M. J., 1. Jan 2019, In : Redox Biology. 20, p. 496-513

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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171 Downloads (Pure)

ComplexBrowser: a tool for identification and quantification of protein complexes in large-scale proteomics datasets

Michalak, W., Tsiamis, V., Schwammle, V. & Rogowska-Wrzesinska, A., Nov 2019, In : Molecular and Cellular Proteomics. 18, 11, p. 2324-2334 12 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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11 Downloads (Pure)

FlashPack: Fast and simple preparation of ultra-high performance capillary columns for LC-MS

Kovalchuk, S. I., Jensen, O. N. & Rogowska-Wrzesinska, A., 1. Feb 2019, In : Molecular and Cellular Proteomics. 18, 2, p. 383-390

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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146 Downloads (Pure)

Identification and quantification of sites of nitration and oxidation in the key matrix protein laminin and the structural consequences of these modifications

Lorentzen, L. G., Chuang, C. Y., Rogowska-Wrzesinska, A. & Davies, M. J., 1. Jun 2019, In : Redox Biology. 24, 4 p., 101226.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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110 Downloads (Pure)
2018

Analysis of extracellular matrix protein chlorination and oxidation by mass spectrometry

Rogowska-Wrzesinska, A., 2018.

Research output: Contribution to conference without publisher/journalPosterResearch

Chlorination and oxidation of human plasma fibronectin by myeloperoxidase-derived oxidants, and its consequences for smooth muscle cell function

Nybo, T., Cai, H., Chuang, C. Y., Gamon, L. F., Rogowska-Wrzesinska, A. & Davies, M. J., 1. Oct 2018, In : Redox Biology. 19, p. 388-400

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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160 Downloads (Pure)

Evaluation of sample preparation methods for mass spectrometry-based proteomic analysis of barley leaves

Wang, W. Q., Jensen, O. N., Møller, I. M., Hebelstrup, K. H. & Rogowska-Wrzesinska, A., 25. Aug 2018, In : Plant Methods. 14, 1, p. 1-13 72.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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194 Downloads (Pure)

Myeloperoxidase-derived chlorination and oxidation of human plasma fibronectin

Rogowska-Wrzesinska, A., 2018.

Research output: Contribution to conference without publisher/journalPosterResearch

Oxidation of disulfide bonds: a novel pathway to protein glutathionylation

Carroll, L., Jiang, S., Rogowska-Wrzesinska, A. & Davies, M., 20. Nov 2018, In : Free Radical Biology and Medicine. 128, 1, p. S50

Research output: Contribution to journalConference abstract in journalResearchpeer-review

Phosphoproteomics in Microbiology: Protocols for Studying Streptomyces coelicolor Differentiation

Manteca, A., Rioseras, B., Rogowska-Wrzesinska, A. & Jensen, O. N., 2018, Microbial Proteomics: Methods and Protocols. Becher, D. (ed.). Humana Press, Vol. 1841. p. 249-260 (Methods in Molecular Biology).

Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

Proteome oxidative carbonylation during oxidative stress-induced premature senescence of WI-38 human fibroblasts

Le Boulch, M., Ahmed, E. K., Rogowska-Wrzesinska, A., Baraibar, M. A. & Friguet, B., 2018, In : Mechanisms of Ageing and Development. 170, p. 59-71

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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150 Downloads (Pure)

Quantitative proteome and phosphoproteome analyses of Streptomyces coelicolor reveal proteins and phosphoproteins modulating differentiation and secondary metabolism

Rioseras, B., Sliaha, P. V., Gorshkov, V., Yagüe, P., López-García, M. T., González-Quiñónez, N., Kovalchuk, S., Rogowska-Wrzesinska, A., Jensen, O. N. & Manteca, A., 1. Aug 2018, In : Molecular and Cellular Proteomics. 17, 8, p. 1591-1611

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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159 Downloads (Pure)
2017

A biotin enrichment strategy identifies novel carbonylated amino acids in proteins from human plasma

Havelund, J. F., Wojdyla, K., Davies, M. J., Jensen, O. N., Møller, I. M. & Rogowska-Wrzesinska, A., 3. Jan 2017, In : Journal of Proteomics. 156, p. 40-51

Research output: Contribution to journalJournal articleResearchpeer-review

Accumulation of histone variant H3.3 with age is associated with profound changes in the histone methylation landscape

Tvardovskiy, A., Schwämmle, V., Kempf, S. J., Rogowska-Wrzesinska, A. & Jensen, O. N., 2017, In : Nucleic Acids Research. 45, 16, p. 9272-9289

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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242 Downloads (Pure)

Nuclear phosphoproteome analysis of 3T3-L1 preadipocyte differentiation reveals system-wide phosphorylation of transcriptional regulators

Rabiee, A., Schwämmle, V., Sidoli, S., Dai, J., Rogowska-Wrzesinska, A., Mandrup, S. & Jensen, O. N., 2017, In : Proteomics. 17, 6, 5 p., 1600248.

Research output: Contribution to journalJournal articleResearchpeer-review

Phosphotyrosine biased enrichment of tryptic peptides from cancer cells by combining pY-MIP and TiO2 affinity resins

Bllaci, L., Torsetnes, S. B., Wierzbicka, C. K., Shinde, S., Sellergren, B., Rogowska-Wrzesinska, A. & Jensen, O. N., 2017, In : Analytical Chemistry. 89, 21, p. 11332–11340

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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153 Downloads (Pure)

Protein Carbonylation in Plants

Møller, I. M., Havelund, J. F. & Rogowska-Wrzesinska, A., 17. May 2017, Protein Carbonylation: Principles, Analysis, and Biological Implications. Ros, J. (ed.). 1. ed. Wiley, p. 321-339 (Wiley series on mass spectrometry).

Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

2016

Acetaminophen-induced S-nitrosylation and S-sulfenylation signalling in 3D cultured hepatocarcinoma cell spheroids

Wojdyla, K., Wrzesinski, K., Williamson, J., Fey, S. J. & Rogowska-Wrzesinska, A., 2016, In : Toxicology Research. 5, 3, p. 905-920

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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211 Downloads (Pure)

Antioxidative low molecular weight compounds in marinated herring (Clupea harengus) salt brine

Gringer, N., Safafar, H., Du Mesnildot, A., Nielsen, H. H., Rogowska-Wrzesinska, A., Undeland, I. & Baron, C. P., 1. Mar 2016, In : Food Chemistry. 194, p. 1164-1171

Research output: Contribution to journalJournal articleResearchpeer-review

Detection and characterization of oxidative modifications to the extracellular matrix protein fibronectin

Nybo, T., Rogowska-Wrzesinska, A. & Davies, M. J., 2016, In : Free Radical Biology & Medicine. 96, Supplement 1, p. S18-S19

Research output: Contribution to journalConference abstract in journalResearchpeer-review

Impaired energy metabolism of senescent muscle satellite cells is associated with oxidative modifications of glycolytic enzymes

Baraibar, M. A., Hyzewicz, J., Rogowska-Wrzesinska, A., Bulteau, A-L., Prip-Buus, C., Butler-Browne, G. & Friguet, B., 4. Dec 2016, In : Aging. 8, 12, p. 3375-3389

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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186 Downloads (Pure)

Subcompartmentalization by cross-membranes during early growth of Streptomyces hyphae

Yagüe, P., Willemse, J., Koning, R. I., Rioseras, B., López-García, M. T., Gonzalez-Quiñonez, N., Lopez-Iglesias, C., Shliaha, P. V., Rogowska-Wrzesinska, A., Koster, A. J., Jensen, O. N., van Wezel, G. P. & Manteca, Á., 2016, In : Nature Communications. 7, 12467, 11 p.

Research output: Contribution to journalJournal articleResearchpeer-review

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266 Downloads (Pure)
2015

A laser ablation ICP-MS based method for multiplexed immunoblot analysis: applications to manganese-dependent protein dynamics of photosystem II in barley (Hordeum vulgare L.)

de Bang, T. C., Petersen, J., Pedas, P. R., Rogowska-Wrzesinska, A., Jensen, O. N., Schjoerring, J. K., Jensen, P. E., Thelen, J. J. & Husted, S., Aug 2015, In : Plant Journal. 83, 3, p. 555-65

Research output: Contribution to journalJournal articleResearchpeer-review

Differential alkylation-based redox proteomics - Lessons learnt

Wojdyla, K. & Rogowska-Wrzesinska, A., 5. Aug 2015, In : Redox Biology. 6, p. 240-252

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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218 Downloads (Pure)

Properties of phosphorylated thymidylate synthase

Frączyk, T., Ruman, T., Wilk, P., Palmowski, P., Rogowska-Wrzesinska, A., Cieśla, J., Zieliński, Z., Nizioł, J., Jarmuła, A., Maj, P., Gołos, B., Wińska, P., Ostafil, S., Wałajtys-Rode, E., Shugar, D. & Rode, W., 24. Aug 2015, In : B B A - Proteins and Proteomics. 1854, 12, p. 1922-1934

Research output: Contribution to journalJournal articleResearchpeer-review

Standardization and quality control in quantifying non-enzymatic oxidative protein modifications in relation to ageing and disease: Why is it important and why is it hard?

Nedić, O., Rogowska-Wrzesinska, A. & Rattan, S. I. S., 14. Apr 2015, In : Redox Biology. 5, p. 91-100

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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149 Downloads (Pure)

Targeted mass spectrometry analysis of the proteins IGF1, IGF2, IBP2, IBP3 and A2GL by blood protein precipitation

Such-Sanmartín, G., Bache, N., Callesen, A. K., Rogowska-Wrzesinska, A. & Jensen, O. N., 15. Jan 2015, In : Journal of Proteomics. 113, p. 29-37 9 p.

Research output: Contribution to journalJournal articleResearchpeer-review

The SNO/SOH TMT strategy for combinatorial analysis of reversible cysteine oxidations

Wojdyla, K., Williamson, J., Roepstorff, P. & Rogowska-Wrzesinska, A., 15. Jan 2015, In : Journal of Proteomics. 113, p. 415-34 20 p.

Research output: Contribution to journalJournal articleResearchpeer-review

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447 Downloads (Pure)

Top-down and Middle-down Protein Analysis Reveals that Intact and Clipped Human Histones Differ in Post-translational Modification Patterns

Tvardovskiy, A., Wrzesinski, K., Sidoli, S., Fey, S. J., Rogowska-Wrzesinska, A. & Jensen, O. N., 30. Sep 2015, In : Molecular and Cellular Proteomics. 14, 12, p. 3142-3153

Research output: Contribution to journalJournal articleResearchpeer-review

158 Downloads (Pure)

Validation of protein carbonyl measurement: A multi-centre study

Augustyniak, E., Adam, A., Wojdyla, K., Rogowska-Wrzesinska, A., Willetts, R., Korkmaz, A., Atalay, M., Weber, D., Grune, T., Borsa, C., Gradinaru, D., Chand Bollineni, R., Fedorova, M. & Griffiths, H. R., 2015, In : Redox Biology. 4C, p. 149-157

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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305 Downloads (Pure)
2014

Acute phencyclidine treatment induces extensive and distinct protein phosphorylation in rat frontal cortex

Palmowski, P., Rogowska-Wrzesinska, A., Williamson, J., Beck, H. C., Mikkelsen, J. D., Hansen, H. H. & Jensen, O. N., 7. Mar 2014, In : Journal of Proteome Research. 13, 3, p. 1578-1592 15 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Analysis of protein carbonylation-pitfalls and promise in commonly used methods

Rogowska-Wrzesinska, A., Wojdyla, K., Nedić, O., Baron, C. P. & Griffiths, H. R., Oct 2014, In : Free Radical Research. 48, 10, p. 1145-62 18 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Heteromer score – using internal standards to assess the quality of proteomic data

Rogowska-Wrzesinska, A., Wrzesinski, K. & Fey, S. J., May 2014, In : Proteomics. 14, 9, p. 1042-7 6 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Impaired metabolism of senescent muscle satellite cells is associated with oxidative modifications of glycolytic enzymes

Baraibar, M., Hyzewicz, J., Rogowska-Wrzesinska, A., Bulteau, A-L., Prip-Buus, C., Butler-Browne, G. & Friguet, B., Oct 2014, In : Free Radical Biology & Medicine. 75 , Suppl 1, p. S23

Research output: Contribution to journalJournal articleResearchpeer-review

Insights into the Cellular Response Triggered by Silver Nanoparticles using Quantitative Proteomics

Verano-Braga, T., Miethling-Graff, R., Wojdyla, K. I., Rogowska-Wrzesinska, A., Brewer, J. R., Erdmann, H. & Kjeldsen, F., 2014, In : A C S Nano. 8, 3, p. 2161–2175

Research output: Contribution to journalJournal articleResearchpeer-review

Isolation of Mitochondria from Potato Tubers

Havelund, J. F., Salvato, F., Chen, M., Rao, R. S. P., Rogowska-Wrzesinska, A., Jensen, O. N., Gang, D. R., Thelen, J. J. & Møller, I. M., 5. Sep 2014, In : Bio-protocol. 4, 17

Research output: Contribution to journalJournal articleResearchpeer-review

Leucoagaricus gongylophorus uses leaf-cutting ants to vector proteolytic enzymes towards new plant substrate

Kooij, P. W., Rogowska-Wrzesinska, A., Hoffmann, D., Roepstorff, P., Boomsma, J. J. & Schiøtt, M., 2014, In : I S M E Journal. 8, May, p. 1032-1040

Research output: Contribution to journalJournal articleResearchpeer-review

Measuring site occupancy: a new perspective on cysteine oxidation

Rogowska-Wrzesinska, A., Wojdyla, K., Williamson, J. & Roepstorff, P., Oct 2014, In : Free Radical Biology & Medicine. 75 , Suppl 1, p. S46-7 P75.

Research output: Contribution to journalConference abstract in journalResearchpeer-review

Proteomic analysis of cAMP-mediated signaling during differentiation of 3 T3-L1 preadipocytes

Borkowski, K., Wrzesinski, K., Rogowska-Wrzesinska, A., Audouze, K., Bakke, J., Petersen, R. K., Haj, F. G., Madsen, L. & Kristiansen, K., 22. Aug 2014, In : BBA General Subjects. 1844, 12, p. 2096-2107

Research output: Contribution to journalJournal articleResearchpeer-review

The cultural divide: exponential growth in classical 2D and metabolic equilibrium in 3D environments

Wrzesinski, K., Rogowska-Wrzesinska, A., Borkowski, K. & Fey, S. J., 22. May 2014. 1 p.

Research output: Contribution to conference without publisher/journalPosterResearchpeer-review

Open Access

The Cultural Divide: Exponential Growth in Classical 2D and Metabolic Equilibrium in 3D Environments

Wrzesinski, K., Rogowska-Wrzesinska, A., Kanlaya, R., Borkowski, K., Schwämmle, V., Joensen, K., Wojdyla, K. I., Carvalho, V. B. & Fey, S. J., 15. Sep 2014, In : P L o S One. 9, 9, p. 1 - 15 15 p., e106973.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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