Research output per year
Research output per year
Fingerprint
Dive into the research topics where ATLAS - Center for Functional Genomics and Tissue Plasticity is active. These topic labels come from the works of this organisation's researchers. Together they form a unique fingerprint.
Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
Researchers
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Jonathan Brewer
- Department of Biochemistry and Molecular Biology
- Bioimaging - Professor
- SDU Climate Cluster - Professor
- ATLAS - Center for Functional Genomics and Tissue Plasticity - Professor
Person: VIP
Research output
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A community effort to optimize sequence-based deep learning models of gene regulation
Random Promoter DREAM Challenge Consortium, Aug 2025, In: Nature Biotechnology. 43, 8, p. 1373-1383Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile4 Downloads (Pure) -
Adipose Tissue Plasticity and Cellular Crosstalk at Single-Cell Resolution during Regression of Obesity
Gammelmark Klinggaard, E., 21. Jan 2025, Syddansk Universitet. Det Naturvidenskabelige Fakultet. 119 p.Research output: Thesis › Ph.D. thesis
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Advances in optical microscopy for food structure characterization
Bonilla, J. C., Via, M. A., Brewer, J. & Clausen, M. P., Oct 2025, In: Food Structure. 46, 17 p., 100484.Research output: Contribution to journal › Journal article › Research › peer-review
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Computational Modeling in Single-Cell Genomics: Linking Genetic Diversity to Cellular Identity and Function
Kavaliauskaite, G., 21. Jan 2025, Syddansk Universitet. Det Naturvidenskabelige Fakultet. 120 p.Research output: Thesis › Ph.D. thesis
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Correction: Aquiferous system, filtration rates and hydrodynamics of the syconoid calcareous sponge Urna sp. (Marine Biology, (2024), 171, 11, (216), 10.1007/s00227-024-04532-0)
Goldstein, J., Bisbo, N., Funch, P., Daugaard, N. D., Larsen, P. S., Brewer, J. R. & Riisgård, H. U., Aug 2025, In: Marine Biology. 172, 8, 120.Research output: Contribution to journal › Comment/debate › Research › peer-review
Open Access
Activities
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ATLAS annual meeting
Siersbæk, M. (Participant)
9. Sept 2024 → 11. Sept 2024Activity: Attending an event › Conference organisation or participation
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Sharepoint - grundlæggende kursus for administratorer
Siersbæk, M. (Participant)
1. Nov 2022Activity: Attending an event › Organisation or participation in workshops, courses or seminars
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LAboratorieøvelser - pædagogisk kursus for undervisere i laboratorier
Siersbæk, M. (Participant)
28. Sept 2022 → 7. Oct 2022Activity: Attending an event › Organisation or participation in workshops, courses or seminars
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Human cell ATLAS general meeting
Siersbæk, M. (Participant)
27. Jun 2022 → 29. Jun 2022Activity: Attending an event › Conference organisation or participation
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ATLAS annual meeting
Siersbæk, M. (Participant)
20. Jun 2022 → 22. Jun 2022Activity: Attending an event › Conference organisation or participation
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Novo Nordisk Fonden - Investigator Grants - Ascending - Unlocking the Deep GPCRome for Accelerated Fibrosis Resolution
Ravnskjær, K. (Project participant)
01/09/2025 → 31/08/2030
Project: Private Foundations
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Uddannelses- og Forskningsministeriet - Sapere Aude - Starting Grant- The secrets of epicardial adipose tissue in diabetes-associated coronary artery disease
Loft, A. (Project participant)
01/01/2026 → 31/12/2029
Project: Research Councils
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Novo Nordisk Fonden - SDU Bioimaging Core Facility Upgrade
Brewer, J. (Project participant)
01/01/2025 → 31/12/2028
Project: Private Foundations
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Lundbeckfonden - LF Fellows - Uncovering a driving role of adipose tissue in metabolic-associated liver fibrosis
Loft, A. (Project participant)
01/09/2023 → 31/08/2028
Project: Private Foundations
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ATLAS: Center for Functional Genomics and Tissue Plasticity
Ravnskjær, K. (Project participant)
01/01/2024 → 31/12/2027
Project: Research
Datasets
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AGO2 localises to cytokinetic protrusions in a p38 dependent manner and is needed for accurate cell division.
Pantazopoulou, I. V. (Creator), Delis, D. A. (Creator), Georgiou, S. (Creator), Pagakis, N. S. (Creator), Filippa, V. (Creator), Dragona, E. (Creator), Kloukina, I. (Creator), Chatzitheodoridis, E. (Creator), Trebicka, J. (Creator), Velentzas, D. A. (Creator), Thiele, M. (Creator), Gagos, S. (Creator), Thanos, D. (Creator), Tseleni-Balafouta, S. (Creator), Stravopodis, J. D. (Creator) & Anastasiadou, E. (Creator), Zenodo, 4. Jan 2021
Dataset
Press/Media
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Forskere: Et varigt vægttab er næsten umuligt
10/12/2025
1 Media contribution
Press/Media: Press / Media
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Forskere baner vej for fremtidens kunstige hud
08/09/2025
1 Media contribution
Press/Media: Press / Media
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Danske forskere: Et varigt vægttab er nærmest umuligt
28/08/2025
1 Media contribution
Press/Media: Press / Media
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SDU-forskere baner vej for fremtidens kunstige hud
26/08/2025
1 Media contribution
Press/Media: Press / Media
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SDU-forskere baner vej for fremtidens kunstige hud
26/08/2025
1 Media contribution
Press/Media: Press / Media
Prizes
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SCC Fast track - Uddelingsrunde april 2024
Svenningsen, P. (Recipient) & Ravnskjær, K. (Recipient), 1. Apr 2024
Prize: Prizes, scholarships, distinctions
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Klinisk Instituts Forskningskommunikationspris
Thiele, M. (Recipient), 2022
Prize: Prizes, scholarships, distinctions
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Master Thesis Award at Pharmacy 2019
Skytthe, M. K. (Recipient), Jun 2019
Prize: Prizes, scholarships, distinctions
Teaching & Supervision
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Transcriptional networks in chronic liver disease
Ravnskjær, K. 01/09/2017 → 31/03/2022
Course: Teaching and supervision › Supervision
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Hepatic tissue plasticity during the development of NASH
Ravnskjær, K. 15/01/2018 → 14/01/2022
Course: Teaching and supervision › Supervision
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BMB514: Immunological techniques
Skytthe, M. K. 01/11/2019 → 31/12/2021
Course: Teaching and supervision › Teaching
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Studies on the effects of angiotensin AT1-receptor antagonists and angiotensin AT2-receptor agonists and the combination thereof on vascular tone in mouse mesenteric arteries
Ravnskjær, K. 01/09/2020 → 01/06/2021
Course: Teaching and supervision › Supervision