Supervised ensembles of prediction methods for subcellular localization

Johannes Aßfalg*, Jing Gong, Hans Peter Kriegel, Alexey Pryakhin, Tiandi Wei, Arthur Zimek

*Kontaktforfatter for dette arbejde

Publikation: Bidrag til bog/antologi/rapport/konference-proceedingKonferencebidrag i proceedingsForskningpeer review

Resumé

In the past decade, many automated prediction methods for the subcellular localization of proteins have been proposed, utilizing a wide range of principles and learning approaches. Based on an experimental evaluation of different methods and on their theoretical properties, we propose to combine a well balanced set of existing approaches to new, ensemble-based prediction methods. The experimental evaluation shows our ensembles to improve substantially over the underlying base methods.

OriginalsprogEngelsk
TitelProceedings of 6th Asia-Pacific Bioinformatics Conference
Publikationsdatodec. 2008
Sider29-38
ISBN (Trykt)978-184816108-5
StatusUdgivet - dec. 2008
Udgivet eksterntJa
Begivenhed6th Asia-Pacific Bioinformatics Conference - Kyoto, Japan
Varighed: 14. jan. 200817. jan. 2008

Konference

Konference6th Asia-Pacific Bioinformatics Conference
LandJapan
ByKyoto
Periode14/01/200817/01/2008
NavnSeries on Advances in Bioinformatics and Computational Biology
Vol/bind6
ISSN1751-6404

Fingeraftryk

Proteins

Citer dette

Aßfalg, J., Gong, J., Kriegel, H. P., Pryakhin, A., Wei, T., & Zimek, A. (2008). Supervised ensembles of prediction methods for subcellular localization. I Proceedings of 6th Asia-Pacific Bioinformatics Conference (s. 29-38). Series on Advances in Bioinformatics and Computational Biology, Bind. 6
Aßfalg, Johannes ; Gong, Jing ; Kriegel, Hans Peter ; Pryakhin, Alexey ; Wei, Tiandi ; Zimek, Arthur. / Supervised ensembles of prediction methods for subcellular localization. Proceedings of 6th Asia-Pacific Bioinformatics Conference. 2008. s. 29-38 (Series on Advances in Bioinformatics and Computational Biology, Bind 6).
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author = "Johannes A{\ss}falg and Jing Gong and Kriegel, {Hans Peter} and Alexey Pryakhin and Tiandi Wei and Arthur Zimek",
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Aßfalg, J, Gong, J, Kriegel, HP, Pryakhin, A, Wei, T & Zimek, A 2008, Supervised ensembles of prediction methods for subcellular localization. i Proceedings of 6th Asia-Pacific Bioinformatics Conference. Series on Advances in Bioinformatics and Computational Biology, bind 6, s. 29-38, 6th Asia-Pacific Bioinformatics Conference, Kyoto, Japan, 14/01/2008.

Supervised ensembles of prediction methods for subcellular localization. / Aßfalg, Johannes; Gong, Jing; Kriegel, Hans Peter; Pryakhin, Alexey; Wei, Tiandi; Zimek, Arthur.

Proceedings of 6th Asia-Pacific Bioinformatics Conference. 2008. s. 29-38 (Series on Advances in Bioinformatics and Computational Biology, Bind 6).

Publikation: Bidrag til bog/antologi/rapport/konference-proceedingKonferencebidrag i proceedingsForskningpeer review

TY - GEN

T1 - Supervised ensembles of prediction methods for subcellular localization

AU - Aßfalg, Johannes

AU - Gong, Jing

AU - Kriegel, Hans Peter

AU - Pryakhin, Alexey

AU - Wei, Tiandi

AU - Zimek, Arthur

PY - 2008/12

Y1 - 2008/12

N2 - In the past decade, many automated prediction methods for the subcellular localization of proteins have been proposed, utilizing a wide range of principles and learning approaches. Based on an experimental evaluation of different methods and on their theoretical properties, we propose to combine a well balanced set of existing approaches to new, ensemble-based prediction methods. The experimental evaluation shows our ensembles to improve substantially over the underlying base methods.

AB - In the past decade, many automated prediction methods for the subcellular localization of proteins have been proposed, utilizing a wide range of principles and learning approaches. Based on an experimental evaluation of different methods and on their theoretical properties, we propose to combine a well balanced set of existing approaches to new, ensemble-based prediction methods. The experimental evaluation shows our ensembles to improve substantially over the underlying base methods.

M3 - Article in proceedings

AN - SCOPUS:84856828208

SN - 978-184816108-5

T3 - Series on Advances in Bioinformatics and Computational Biology

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BT - Proceedings of 6th Asia-Pacific Bioinformatics Conference

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Aßfalg J, Gong J, Kriegel HP, Pryakhin A, Wei T, Zimek A. Supervised ensembles of prediction methods for subcellular localization. I Proceedings of 6th Asia-Pacific Bioinformatics Conference. 2008. s. 29-38. (Series on Advances in Bioinformatics and Computational Biology, Bind 6).