Glycomic and sialoproteomic data of gastric carcinoma cells overexpressing ST3GAL4

Stefan Mereiter, Ana Magalhães, Barbara Adamczyk, Chunsheng Jin, Andreia Almeida, Lylia Drici, Maria Ibáñez-Vea, Martin R Larsen, Daniel Kolarich, Niclas G Karlsson, Celso A Reis

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Resumé

Gastric carcinoma MKN45 cells stably transfected with the full-length ST3GAL4 gene were characterised by glycomic and sialoproteomic analysis. Complementary strategies were applied to assess the glycomic alterations induced by ST3GAL4 overexpression. The N- and O-glycome data were generated in two parallel structural analyzes, based on PGC-ESI-MS/MS. Data on glycan structure identification and relative abundance in ST3GAL4 overexpressing cells and respective mock control are presented. The sialoproteomic analysis based on titanium-dioxide enrichment of sialopeptides with subsequent LC-MS/MS identification was performed. This analysis identified 47 proteins with significantly increased sialylation. The data in this article is associated with the research article published in Biochim Biophys Acta "Glycomic analysis of gastric carcinoma cells discloses glycans as modulators of RON receptor tyrosine kinase activation in cancer" [1].

OriginalsprogEngelsk
TidsskriftData in Brief
Vol/bind7
Sider (fra-til)814-833
ISSN2352-3409
DOI
StatusUdgivet - jun. 2016

Fingeraftryk

Research
Neoplasms
Proteins
titanium dioxide
rice bran saccharide

Citer dette

Mereiter, S., Magalhães, A., Adamczyk, B., Jin, C., Almeida, A., Drici, L., ... Reis, C. A. (2016). Glycomic and sialoproteomic data of gastric carcinoma cells overexpressing ST3GAL4. Data in Brief, 7, 814-833. https://doi.org/10.1016/j.dib.2016.03.022
Mereiter, Stefan ; Magalhães, Ana ; Adamczyk, Barbara ; Jin, Chunsheng ; Almeida, Andreia ; Drici, Lylia ; Ibáñez-Vea, Maria ; Larsen, Martin R ; Kolarich, Daniel ; Karlsson, Niclas G ; Reis, Celso A. / Glycomic and sialoproteomic data of gastric carcinoma cells overexpressing ST3GAL4. I: Data in Brief. 2016 ; Bind 7. s. 814-833.
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title = "Glycomic and sialoproteomic data of gastric carcinoma cells overexpressing ST3GAL4",
abstract = "Gastric carcinoma MKN45 cells stably transfected with the full-length ST3GAL4 gene were characterised by glycomic and sialoproteomic analysis. Complementary strategies were applied to assess the glycomic alterations induced by ST3GAL4 overexpression. The N- and O-glycome data were generated in two parallel structural analyzes, based on PGC-ESI-MS/MS. Data on glycan structure identification and relative abundance in ST3GAL4 overexpressing cells and respective mock control are presented. The sialoproteomic analysis based on titanium-dioxide enrichment of sialopeptides with subsequent LC-MS/MS identification was performed. This analysis identified 47 proteins with significantly increased sialylation. The data in this article is associated with the research article published in Biochim Biophys Acta {"}Glycomic analysis of gastric carcinoma cells discloses glycans as modulators of RON receptor tyrosine kinase activation in cancer{"} [1].",
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author = "Stefan Mereiter and Ana Magalh{\~a}es and Barbara Adamczyk and Chunsheng Jin and Andreia Almeida and Lylia Drici and Maria Ib{\'a}{\~n}ez-Vea and Larsen, {Martin R} and Daniel Kolarich and Karlsson, {Niclas G} and Reis, {Celso A}",
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Mereiter, S, Magalhães, A, Adamczyk, B, Jin, C, Almeida, A, Drici, L, Ibáñez-Vea, M, Larsen, MR, Kolarich, D, Karlsson, NG & Reis, CA 2016, 'Glycomic and sialoproteomic data of gastric carcinoma cells overexpressing ST3GAL4', Data in Brief, bind 7, s. 814-833. https://doi.org/10.1016/j.dib.2016.03.022

Glycomic and sialoproteomic data of gastric carcinoma cells overexpressing ST3GAL4. / Mereiter, Stefan; Magalhães, Ana; Adamczyk, Barbara; Jin, Chunsheng; Almeida, Andreia; Drici, Lylia; Ibáñez-Vea, Maria; Larsen, Martin R; Kolarich, Daniel; Karlsson, Niclas G; Reis, Celso A.

I: Data in Brief, Bind 7, 06.2016, s. 814-833.

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

TY - JOUR

T1 - Glycomic and sialoproteomic data of gastric carcinoma cells overexpressing ST3GAL4

AU - Mereiter, Stefan

AU - Magalhães, Ana

AU - Adamczyk, Barbara

AU - Jin, Chunsheng

AU - Almeida, Andreia

AU - Drici, Lylia

AU - Ibáñez-Vea, Maria

AU - Larsen, Martin R

AU - Kolarich, Daniel

AU - Karlsson, Niclas G

AU - Reis, Celso A

PY - 2016/6

Y1 - 2016/6

N2 - Gastric carcinoma MKN45 cells stably transfected with the full-length ST3GAL4 gene were characterised by glycomic and sialoproteomic analysis. Complementary strategies were applied to assess the glycomic alterations induced by ST3GAL4 overexpression. The N- and O-glycome data were generated in two parallel structural analyzes, based on PGC-ESI-MS/MS. Data on glycan structure identification and relative abundance in ST3GAL4 overexpressing cells and respective mock control are presented. The sialoproteomic analysis based on titanium-dioxide enrichment of sialopeptides with subsequent LC-MS/MS identification was performed. This analysis identified 47 proteins with significantly increased sialylation. The data in this article is associated with the research article published in Biochim Biophys Acta "Glycomic analysis of gastric carcinoma cells discloses glycans as modulators of RON receptor tyrosine kinase activation in cancer" [1].

AB - Gastric carcinoma MKN45 cells stably transfected with the full-length ST3GAL4 gene were characterised by glycomic and sialoproteomic analysis. Complementary strategies were applied to assess the glycomic alterations induced by ST3GAL4 overexpression. The N- and O-glycome data were generated in two parallel structural analyzes, based on PGC-ESI-MS/MS. Data on glycan structure identification and relative abundance in ST3GAL4 overexpressing cells and respective mock control are presented. The sialoproteomic analysis based on titanium-dioxide enrichment of sialopeptides with subsequent LC-MS/MS identification was performed. This analysis identified 47 proteins with significantly increased sialylation. The data in this article is associated with the research article published in Biochim Biophys Acta "Glycomic analysis of gastric carcinoma cells discloses glycans as modulators of RON receptor tyrosine kinase activation in cancer" [1].

KW - Journal Article

U2 - 10.1016/j.dib.2016.03.022

DO - 10.1016/j.dib.2016.03.022

M3 - Journal article

C2 - 27077082

VL - 7

SP - 814

EP - 833

JO - Data in Brief

JF - Data in Brief

SN - 2352-3409

ER -

Mereiter S, Magalhães A, Adamczyk B, Jin C, Almeida A, Drici L et al. Glycomic and sialoproteomic data of gastric carcinoma cells overexpressing ST3GAL4. Data in Brief. 2016 jun;7:814-833. https://doi.org/10.1016/j.dib.2016.03.022