Aktiviteter pr. år
Abstrakt
We utilize a coarse-grained directional dynamic bonding DNA model [C. Svaneborg, Comp. Phys. Comm. (In Press DOI:10.1016/j.cpc.2012.03.005)] to study DNA self-assembly and DNA computation. In our DNA model, a single nucleotide is represented by a single interaction site, and complementary sites can hybridize reversibly. Along with the dynamic hybridization bonds, angular and dihedral bonds are dynamically introduced and removed to model the collective properties of double helix structure on the DNA zippering dynamics. We use this DNA model to simulate the temperature dependent self-assembly of DNA tetrahedra at several temperatures, a DNA icosahedron, and also strand displacement operations used in DNA computation.
Originalsprog | Engelsk |
---|---|
Bogserie | Lecture Notes in Computer Science |
Vol/bind | 7433 |
Antal sider | 12 |
ISSN | 0302-9743 |
DOI | |
Status | Udgivet - 2012 |
Bibliografisk note
Vol. 7433: DNA Computing and Molecular ProgrammingFingeraftryk Dyk ned i forskningsemnerne om 'DNA Self-Assembly and Computation Studied with a Coarse-grained Dynamic Bonded Model'. Sammen danner de et unikt fingeraftryk.
Relaterede Aktiviteter
- 1 Foredrag og præsentationer i privat eller offentlig virksomhed
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Dynamic Bonded DNA models
Carsten Svaneborg (Foredragsholder)
15. aug. 2012Aktivitet: Foredrag og mundtlige bidrag › Foredrag og præsentationer i privat eller offentlig virksomhed