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  • 2019
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  • Martin Røssel Larsen
2015

Automated N-glycan profiling of a mutant Trypanosoma rangeli sialidase expressed in Pichia pastoris, using tandem mass spectrometry and bioinformatics

Li, H., Rasmussen, M. I., Larsen, M. R., Guo, Y., Jers, C., Palmisano, G., Mikkelsen, J. D. & Kirpekar, F., dec. 2015, I : Glycobiology. 25, 12, s. 1350-1361

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

Characterization of human neural differentiation from pluripotent stem cells using proteomics/PTMomics: current state-of-the-art and challenges

Braga, M. N. D. M., Meyer, M., Zeng, X. & Larsen, M. R., 2015, I : Proteomics. 15, 4, s. 656-74

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

GLYCOSYLATED POLYPEPTIDES ORIGINATING FROM ENTEROTOXIGENIC ESCHERICHIA COLI (ETEC): -

Bidragets oversatte titel: -: -Boysen, A., Møller-Jensen, J., Palmisano, G. & Larsen, M. R., 15. okt. 2015, IPC nr. A61K 39/108 (2006.01), Patentnr. WO/2015/154783, Prioritetsdato 10. apr. 2014, Prioritetsnr. PCT/DK2015/050089

Publikation: Patent

Important options available - from start to finish -for translating proteomics results to clinical chemistry

Heegaard, N. H. H., Ostergaard, O., Bahl, J. M. C., Overgaard, M., Beck, H. C., Rasmussen, L. M. & Larsen, M. R., 2015, I : Proteomics - Clinical Applications. 9, 1-2, s. 235-252

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

Optimization of calmodulin-affinity chromatography for brain and organelles

Kulej, K., Sidoli, S., Palmisano, G., Edwards, A. V. G., Robinson, P. J. & Larsen, M. R., 2015, I : EuPA Open Proteonomics. 8, s. 55-67

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Proteotranscriptomic profiling of 231-BR breast cancer cells: Identification of potential biomarkers and therapeutic targets for brain metastasis

Dun, M. D., Chalkley, R. J., Faulkner, S., Keene, S., Avery-Kiejda, K. A., Scott, R. J., Falkenby, L. G., Cairns, M. J., Larsen, M. R., Bradshaw, R. A. & Hondermarck, H., 2015, I : Molecular and Cellular Proteomics. 14, 9, s. 2316-2330

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Quantitative Proteome Analysis Reveals Increased Content of Basement Membrane Proteins in Arteries from Patients with Type 2 Diabetes and Lower Levels among Metformin Users

Rørdam Preil, S., Kristensen, L. P., Beck, H. C., Jensen, P. S., Nielsen, P. S., Steiniche, T., Bjørling-Poulsen, M., Larsen, M. R., Hansen, M. L. & Rasmussen, L. M., 14. sep. 2015, I : Circulation: Cardiovascular Genetics. 8, s. 727-35

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

Quantitative proteomics analysis of platelet-derived microparticles reveals distinct protein signatures when stimulated by different physiological agonists

Milioli, M., Vea, M. I., Sidoli, S., Palmisano, G., Careri, M. & Larsen, M. R., 2015, I : Journal of Proteomics. 121, s. 56-66

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The mRNA decay factor PAT1 functions in a pathway including MAP kinase 4 and immune receptor SUMM2

Roux, M. E., Rasmussen, M. W., Palma, K., Lolle, S., Regue, A. M., Bethke, G., Glazebrook, J., Zhang, W. P., Sieburth, L., Larsen, M. R., Mundy, J. & Petersen, M., 2015, I : E M B O Journal. 34, 5, s. 593-608

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Unraveling incompatibility between wheat and the fungal pathogen Zymoseptoria tritici through apoplastic proteomics

Yang, F., Li, W., Derbyshire, M., Larsen, M. R., Rudd, J. J. & Palmisano, G., 2015, I : BMC Genomics. 16, 1, 12 s., 368.

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2016

An integrated proteomics approach shows synaptic plasticity changes in an APP/PS1 Alzheimer's mouse model

Kempf, S. J., Metaxas, A., Ibáñez-Vea, M., Darvesh, S., Finsen, B. & Larsen, M. R., 7. jun. 2016, I : Oncotarget. 7, 23, s. 33627-33648

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A novel mass spectrometric strategy "BEMAP" reveals Extensive O-linked protein glycosylation in Enterotoxigenic Escherichia coli

Boysen, A., Palmisano, G., Krogh, T. J., Duggin, I. G., Larsen, M. R. & Møller-Jensen, J., 26. aug. 2016, I : Scientific Reports. 6, 13 s., 32016.

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Chronic low-dose-rate ionising radiation affects the hippocampal phosphoproteome in the ApoE-/- Alzheimer's mouse model

Kempf, S. J., Janik, D., Barjaktarovic, Z., Braga-Tanaka III, I., Tanaka, S., Neff, F., Saran, A., Larsen, M. R. & Tapio, S., 2016, I : OncoTarget. 7, 44, s. 71817-71832

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CRISPR/Cas9-mediated mutation revealed cytoplasmic tail is dispensable for IZUMO1 function and male fertility

Young, S. A. M., Miyata, H., Satouh, Y., Muto, M., Larsen, M. R., Aitken, R. J., Baker, M. A. & Ikawa, M., dec. 2016, I : Reproduction. 152, 6, s. 665-672

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Detection of proteolytic signatures for Parkinson's disease

Jordal, P. L., Dyrlund, T. F., Winge, K., Larsen, M. R., Danielsen, E. H., Wells, J. A., Otzen, D. E. & Enghild, J. J., 1. feb. 2016, I : Future Neurology. 11, 1, s. 15-32

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Glycomic analysis of gastric carcinoma cells discloses glycans as modulators of RON receptor tyrosine kinase activation in cancer

Mereiter, S., Magalhães, A., Adamczyk, B., Jin, C., Almeida, A., Drici, L., Ibáñez-Vea, M., Gomes, C., Ferreira, J. A., Afonso, L. P., Santos, L. L., Larsen, M. R., Kolarich, D., Karlsson, N. G. & Reis, C. A., aug. 2016, I : BBA Reviews on Cancer. 1860, 8, s. 1795-1808

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Glycomic and sialoproteomic data of gastric carcinoma cells overexpressing ST3GAL4

Mereiter, S., Magalhães, A., Adamczyk, B., Jin, C., Almeida, A., Drici, L., Ibáñez-Vea, M., Larsen, M. R., Kolarich, D., Karlsson, N. G. & Reis, C. A., jun. 2016, I : Data in Brief. 7, s. 814-833

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High-performance hybrid Orbitrap mass spectrometers for quantitative proteome analysis: Observations and implications

Williamson, J. C., Edwards, A. V. G., Verano-Braga, T., Schwämmle, V., Kjeldsen, F., Jensen, O. N. & Larsen, M. R., mar. 2016, I : Proteomics. 16, 6, s. 907-914

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Improving the Phosphoproteome Coverage for Limited Sample Amounts Using TiO2-SIMAC-HILIC (TiSH) Phosphopeptide Enrichment and Fractionation

Engholm-Keller, K. & Larsen, M. R., 2016, Phospho-Proteomics : Methods and Protocols. Stechow, L. V. (red.). 2. udg. Springer, Bind Part III. s. 161-177 (Methods in Molecular Biology, Bind 1335).

Publikation: Bidrag til bog/antologi/rapport/konference-proceedingBidrag til bog/antologiForskningpeer review

Phosphopeptide enrichment by immobilized metal affinity chromatography

Thingholm, T. E. & Larsen, M. R., 2016, Phospho-Proteomics: Methods and Protocols. von Stechow, L. (red.). 2. udg. Humana Press, s. 123-133 (Methods in Molecular Biology, Bind 1355).

Publikation: Bidrag til bog/antologi/rapport/konference-proceedingBidrag til bog/antologiForskningpeer review

Proteomic identification of putative microRNA394 target genes in Arabidopsis thaliana identifies major latex protein family members critical for normal development

Litholdo, C. G., Parker, B., Eamens, A. L., Larsen, M. R., Cordwell, S. & Waterhouse, P. M., jun. 2016, I : Molecular and Cellular Proteomics. 15, 6, s. 2033-2047

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Sequential elution from IMAC (SIMAC): An efficient method for enrichment and separation of mono-and multi-phosphorylated peptides

Thingholm, T. E. & Larsen, M. R., 2016, Phospho-Proteomics: Methods and Protocols. von Stechow, L. (red.). Humana Press, s. 147-160 (Methods in Molecular Biology, Bind 1355).

Publikation: Bidrag til bog/antologi/rapport/konference-proceedingBidrag til bog/antologiForskningpeer review

Simultaneous enrichment of cysteine-containing peptides and phosphopeptides using a cysteine-specific phosphonate adaptable tag (CysPAT) in combination with titanium dioxide (TiO2) chromatography

Huang, H., Pedersen, M. H., Ibañez-Vea, M., Lassen, P. S., Larsen, M. R. & Palmisano, G., 2016, I : Molecular and Cellular Proteomics. 15, 10, s. 3282-3296

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The arrhythmogenic calmodulin mutation D129G dysregulates cell growth, calmodulin-dependent kinase II activity, and cardiac function in zebrafish

Berchtold, M. W., Zacharias, T., Kulej, K., Wang, K., Torggler, R., Jespersen, T., Chen, J-N., Larsen, M. R. & la Cour, J. M., 23. dec. 2016, I : Journal of Biological Chemistry. 291, 52, s. 26636-26646

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The Splicing Efficiency of Activating HRAS Mutations Can Determine Costello Syndrome Phenotype and Frequency in Cancer

Hartung, A-M., Swensen, J., Uriz, I. E., Kristjansdottir, K., Petersen, U. S. S., Bang, J. M. V., Guerra, B., Andersen, H. S., Dobrowolski, S. F., Carey, J. C., Yu, P., Vaughn, C., Calhoun, A., Larsen, M. R., Dyrskjøt, L., Stevenson, D. A. & Andresen, B. S., 2016, I : P L o S Genetics. 12, 5, s. e1006039

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The use of titanium dioxide for selective enrichment of phosphorylated peptides

Thingholm, T. E. & Larsen, M. R., 2016, Phospho-Proteomics: Methods and Protocols. von Stechow, L. (red.). Humana Press, s. 135-146 (Methods in Molecular Biology, Bind 1355).

Publikation: Bidrag til bog/antologi/rapport/konference-proceedingBidrag til bog/antologiForskningpeer review

2017

Alterations in the Cerebral Microvascular Proteome Expression Profile After Transient Global Cerebral Ischemia in Rat

Spray, S., Johansson, S. E., Edwards, A. V. G., Larsen, M. R., Radziwon-Balicka, A., Povlsen, G. K. & Edvinsson, L., 2017, I : Journal of Molecular Neuroscience. 61, 3, s. 396–411

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Characterization of the phosphoproteome and sialoproteome in brain tissues by mass spectrometry

Ibáñez-Vea, M., Kempf, S. J. & Larsen, M. R., 2017, Current Proteomic Approaches Applied to Brain Function. Santamaría, E. & Fernández-Irigoyen, J. (red.). Humana Press, s. 191-206 (Neuromethods, Bind 127).

Publikation: Bidrag til bog/antologi/rapport/konference-proceedingBidrag til bog/antologiForskningpeer review

Comprehensive glycoprofiling of the epimastigote and trypomastigote stages of Trypanosoma cruzi

Alves, M. J. M., Kawahara, R., Viner, R., Colli, W., Mattos, E. C., Thaysen-Andersen, M., Larsen, M. R. & Palmisano, G., 16. jan. 2017, I : Journal of Proteomics. 151, s. 182-192

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Convergent Akt activation drives acquired EGFR inhibitor resistance in lung cancer

Jacobsen, K., Bertran-Alamillo, J., Molina, M. A., Teixidó, C., Karachaliou, N., Pedersen, M. H., Castellví, J., Garzón, M., Codony-Servat, C., Codony-Servat, J., Giménez-Capitán, A., Drozdowskyj, A., Viteri, S., Larsen, M. R., Lassen, U., Felip, E., Bivona, T. G., Ditzel, H. J. & Rosell, R., 1. dec. 2017, I : Nature Communications. 8, 14 s., 410.

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Elucidation of altered pathways in tumor-initiating cells of triple-negative breast cancer: A useful cell model system for drug screening

Christensen, A. G., Ehmsen, S., Terp, M. G., Batra, R., Alcaraz, N., Baumbach, J., Noer, J. B., Moreira, J. M. A., Leth-Larsen, R., Larsen, M. R. & Ditzel, H. J., aug. 2017, I : Stem Cells. 35, 8, s. 1898–1912

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GLYCOSYLATED YGHJ POLYPEPTIDES FROM ENTEROTOXIGENIC ESCHERICHIA COLI (ETEC)

Boysen, A., Møller-Jensen, J., Palmisano, G. & Larsen, M. R., 13. apr. 2017, Patentnr. WO2017059864 (A1), 13. apr. 2017, Prioritetsdato 6. okt. 2015, Prioritetsnr. EP20150188608

Publikation: Patent

"Highly increased expression of astrocytic cytokine in neocortex of Alzheimer’s patients investigated by proteomics"

Thygesen, C., Kempf, S., Metaxas, A., Darvesh, S., Larsen, M. R. & Finsen, B., 2017.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskningpeer review

Novel DNA coding regions and protein arginylation reveal unexplored T. cruzi proteome and PTMs

de Oliveira, G. S., Kawahara, R., Rosa-Fernandes, L., Avila, C. C., Larsen, M. R., Pereira Alves, J. M. & Palmisano, G., 2017, I : International Journal of Mass Spectrometry. 418, s. 51-66

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Proteomic Expression Changes in Large Cerebral Arteries After Experimental Subarachnoid Hemorrhage in Rat Are Regulated by the MEK-ERK1/2 Pathway

Müller, A. H., Edwards, A. V. G., Larsen, M. R., Nielsen, J., Warfvinge, K., Povlsen, G. K. & Edvinsson, L., 2017, I : Journal of Molecular Neuroscience. 62, 3-4, s. 380-394

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TNFα affects CREB-mediated neuroprotective signaling pathways of synaptic plasticity in neurons as revealed by proteomics and phospho-proteomics

Jensen, P., Myhre, C. L., Lassen, P., Metaxas, A., Khan, A. M., Lambertsen, K. L., Babcock, A., Finsen, B., Larsen, M. R. & Kempf, S., 2017, I : OncoTarget. 8, 36, s. 60223-60242

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Understanding Alzheimer's disease by global quantification of protein phosphorylation and sialylated N-linked glycosylation profiles: A chance for new biomarkers in neuroproteomics?

Lassen, P. S., Thygesen, C., Larsen, M. R. & Kempf, S. J., 2017, I : Journal of Proteomics. 161, May, s. 11-25

Publikation: Bidrag til tidsskriftReviewForskningpeer review

2019

Ageing and amyloidosis underlie the molecular and pathological alterations of tau in a mouse model of familial Alzheimer’s disease

Metaxas, A., Thygesen, C., Kempf, S. J., Anzalone, M., Vaitheeswaran, R., Petersen, S., Landau, A. M., Audrain, H., Teeling, J. L., Darvesh, S., Brooks, D. J., Larsen, M. R. & Finsen, B., 31. okt. 2019, I : Scientific Reports. 9, 1, 15 s., 15758.

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A Systems-level Characterization of the Differentiation of Human Embryonic Stem Cells into Mesenchymal Stem Cells

Billing, A. M., Dib, S. S., Bhagwat, A. M., da Silva, I. T., Drummond, R. D., Hayat, S., Al-Mismar, R., Ben-Hamidane, H., Goswami, N., Engholm-Keller, K., Larsen, M. R., Suhre, K., Rafii, A. & Graumann, J., 1. okt. 2019, I : Molecular and Cellular Proteomics. 18, 10, s. 1950-1966

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Cellular and molecular abnormalities in brain organoids derived from autistic patients

Ilieva, M., Kamand, M., Forsberg, S. L., Larsen, M. R. & Tanja, M., dec. 2019, I : European Neuropsychopharmacology. 29, Suppl. 6, s. S359-S360 P.510.

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First-trimester proteomic profiling identifies novel predictors of gestational diabetes mellitus

Ravnsborg, T., Svaneklink, S., Andersen, L. L. T., Larsen, M. R., Jensen, D. M. & Overgaard, M., 27. mar. 2019, I : PLOS ONE. 14, 3, 13 s., e0214457.

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Integrated proteomics reveals apoptosis-related mechanisms associated with placental malaria

Kawahara, R., Rosa-Fernandes, L., Dos Santos, A. F., Bandeira, C. L., Dombrowski, J. G., Souza, R. M., da Fonseca, M. P., Festuccia, W. T., Labriola, L., Larsen, M. R., Marinho, C. R. F. & Palmisano, G., 1. feb. 2019, I : Molecular and Cellular Proteomics. 18, 2, s. 182-199

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PARK2 Mutation Causes Metabolic Disturbances and Impaired Survival of Human iPSC-Derived Neurons

Bogetofte Thomasen, H., Jensen, P., Ryding, M. A. J. G., Schmidt, S. I., Okarmus, J., Ritter, L., Worm, C. S., Hohnholt, M., Azevedo, C., Roybon, L., Bak, L. K., Waagepetersen, H. S., Ryan, B. J., Wade-Martins, R., Larsen, M. R. & Meyer, M., 5. jul. 2019, I : Frontiers in Cellular Neuroscience. 13, 14 s., 297.

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Perturbations in RhoA signalling cause altered migration and impaired neuritogenesis in human iPSC-derived neural cells with PARK2 mutation

Bogetofte, H., Jensen, P., Okarmus, J., Schmidt, S. I., Agger, M., Ryding, M., Nørregaard, P., Fenger, C., Zeng, X., Graakjær, J., Ryan, B. J., Wade-Martins, R., Larsen, M. R. & Meyer, M., dec. 2019, I : Neurobiology of Disease. 132, 14 s., 104581.

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Proteomic Analysis of Restored Insulin Production and Trafficking in Obese Diabetic Mouse Pancreatic Islets following Euglycemia

Kang, T., Boland, B. B., Alarcon, C., Grimsby, J. S., Rhodes, C. J. & Larsen, M. R., 6. sep. 2019, I : Journal of Proteome Research. 18, 9, s. 3245-3258

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Proteomic profiling of mouse epididymosomes reveals their contributions to post-testicular sperm maturation

Nixon, B., De Iuliis, G. N., Hart, H. M., Zhou, W., Mathe, A., Bernstein, I., Anderson, A. L., Stanger, S. J., Skerrett-Byrne, D. A., Jamaluddin, M. F. B., Almazi, J. G., Bromfield, E. G., Larsen, M. R. & Dun, M. D., 15. mar. 2019, I : Molecular and Cellular Proteomics. 18, Suppl. 1, s. S91-S108

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Proteomic signatures of neuroinflammation in Alzheimer's disease, multiple sclerosis and ischemic stroke

Thygesen, C., Larsen, M. R. & Finsen, B., jul. 2019, I : Expert Review of Proteomics. 16, 7, s. 601-611

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Proteomics insights into the responses of Saccharomyces cerevisiae during mixed-culture alcoholic fermentation with Lachancea thermotolerans

Peng, C., Andersen, B., Arshid, S., Larsen, M. R., Albergaria, H., Lametsch, R. & Arneborg, N., sep. 2019, I : FEMS Microbiology Ecology. 95, 9, 16 s.

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Zika virus impairs neurogenesis and synaptogenesis pathways in human neural stem cells and neurons

Rosa-Fernandes, L., Cugola, F. R., Russo, F. B., Kawahara, R., de Melo Freire, C. C., Leite, P. E. C., Bassi Stern, A. C., Angeli, C. B., de Oliveira, D. B. L., Melo, S. R., Zanotto, P. M. D. A., Durigon, E. L., Larsen, M. R., Beltrão-Braga, P. C. B. & Palmisano, G., 15. mar. 2019, I : Frontiers in cellular neuroscience. 13, 16 s., 64.

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