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Publikationer 2001 2019

2019

Angiotensin-(1-7) oral treatment after experimental myocardial infarction leads to downregulation of CXCR4

Gómez-Mendoza, D. P., Marques, F. D., Melo-Braga, M. N., Sprenger, R. R., Sinisterra, R. D., Kjeldsen, F., Santos, R. A. & Verano-Braga, T., 30. sep. 2019, I : Journal of Proteomics. 208, 11 s., 103486.

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

CXC Chemokines
Chemokine Receptors
Angiotensins
Down-Regulation
angiotensin I (1-7)

Assessment of protein extraction and digestion efficiency of well-established shotgun protocols for heart proteomics

Rodrigues-Ribeiro, L., Melo-Braga, M. N., Kjeldsen, F., Gómez-Mendoza, D. P. & Verano-Braga, T., 1. aug. 2019, I : Analytical Biochemistry. 578, s. 51-59

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

Firearms
Proteolysis
Proteins
Buffers
Tissue

DirectMS1: MS/MS-free identification of 1000 proteins of cellular proteomes in 5 minutes

Ivanov, M. V., Bubis, J. A., Gorshkov, V., Tarasova, I. A., Levitsky, L. I., Lobas, A. A., Solovyeva, E. M., Pridatchenko, M. L., Kjeldsen, F. & Gorshkov, M. V., 5. sep. 2019, I : BioRxiv. 17 s.

Publikation: Bidrag til tidsskriftTidsskriftartikelForskning

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Five-Minute Proteome: An MS/MS-Free Approach to Protein Identification and Quantification

Ivanov, V., Bubis, J. A., Gorshkov, V., Tarasova, I. A., Solovyeva, E. M., Levitsky, L. I., Lobas, A. A., Pridatchenko, M. L., Kjeldsen, F. & Gorshkov, M. V., 2019.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskningpeer review

Neutrophil Extracellular Trap Formation in the Lung as Response to Magnetic Cobalt Ferrite Nanoparticles

Billing, A., Knudsen, K. B., Wallin, H., Tang, S. VY., Lynch, I., Vogel, U. & Kjeldsen, F., 2019.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskningpeer review

89 Downloads (Pure)

Protein corona formed on silver nanoparticles in blood plasma is highly selective and resistant to physicochemical changes of the solution

Gorshkov, V., Bubis, J. A., Solovyeva, E. M., Gorshkov, M. V. & Kjeldsen, F., 18. mar. 2019, I : Environmental Science: Nano. 6, 4, s. 1089-1098

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

Åben adgang
Fil
Silver
Blood
Nanoparticles
Plasmas
Hydrophobicity

Searching for the Ethanol-Tolerant Yeast: Rpn4- and Proteasome-Dependent Yeast Proteome Remodeling in Response to Ethanol Stress

Bubis, J. A., Tarasova, I. A., Gorshkov, V., Karpov, V. L., Spasskaya, D. S., Kjeldsen, F., Gorshkov, M. V. & Karpov, D. S., 2019.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskningpeer review

77 Downloads (Pure)

Silver nanoparticle-induced expression of proteins related to oxidative stress and neurodegeneration in an in vitro human blood-brain barrier model

Khan, A. M., Korzeniowska, B., Gorshkov, V., Tahir, M., Schrøder, H., Skytte, L., Rasmussen, K. L., Khandige, S., Møller-Jensen, J. & Kjeldsen, F., 9. jan. 2019, I : Nanotoxicology. 13, 2, s. 221-239

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

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Oxidative stress
Silver
Nanoparticles
Proteins
Endothelial cells
2018

Co-exposure to silver nanoparticles and cadmium induce metabolic adaptation in HepG2 cells

Kjeldsen, F., 2018.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskningpeer review

74 Downloads (Pure)

Co-exposure to silver nanoparticles and cadmium induce metabolic adaptation in HepG2 cells

Miranda, R. R., Gorshkov, V., Korzeniowska, B., Kempf, S. J., Neto, F. F. & Kjeldsen, F., 11. jul. 2018, I : Nanotoxicology. 12, 7, s. 781-795

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

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Cadmium
Silver
Nanoparticles
Proteins
Administrative data processing

Co-exposure to silver nanoparticles and cadmium ions induces metabolic adaptation in HepG2 cells

Kjeldsen, F., 2018.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskningpeer review

99 Downloads (Pure)

Comparative proteomics as a tool for identifying specific alterations within interferon response pathways in human glioblastoma multiforme cells

Tarasova, I. A., Tereshkova, A. V., Lobas, A. A., Solovyeva, E. M., Sidorenko, A. S., Gorshkov, V., Kjeldsen, F., Bubis, J. A., Ivanov, M. V., Ilina, I. Y., Moshkovskii, S. A., Chumakov, P. M. & Gorshkov, M. V., 1. jan. 2018, I : OncoTarget. 9, 2, s. 1785-1802

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

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Glioblastoma
Oncolytic Virotherapy
Oncolytic Viruses
Viruses
Cell Line

Comparative proteomics study for elucidation of potential mechanisms underlying yeast resistance to alcohols

Kjeldsen, F., 2018.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskningpeer review

LC-MS/MS-based characterization of glioblastoma cell responses to type I interferons for establishing defects in antiviral mechanisms

Kjeldsen, F., 2018.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskningpeer review

Perturbation of Protein Conformation has Minor Impact on Nanoparticle Corona Composition

Kjeldsen, F., 2018.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskningpeer review

Proteome profiling of bronchioalveolar lavage fluid after exposure to magnetic iron and cobalt oxide nanoparticles

Kjeldsen, F., 2018.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskningpeer review

136 Downloads (Pure)

SuperQuant-assisted comparative proteome analysis of glioblastoma subpopulations allows for identification of potential novel therapeutic targets and cell markers

Verano-Braga, T., Gorshkov, V., Munthe, S., Sørensen, M. D., Kristensen, B. W. & Kjeldsen, F., 6. feb. 2018, I : Oncotarget. 9, 10, s. 9400-9414

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

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Proteome
Glioblastoma
MicroRNAs
2-Oxoglutarate 5-Dioxygenase Procollagen-Lysine
Activation Analysis
2017

Co-exposure of silver nanoparticles and Cd2+ induce disruption of the metabolic reprogramming in HepG2 cells

Kjeldsen, F., 2017.

Publikation: Konferencebidrag uden forlag/tidsskriftKonferenceabstrakt til konferenceForskningpeer review

On the Authenticity of a Relic: An Archaeometric Investigation of the Supposed Bread Sack of Saint Francesco of Assisi

Rasmussen, K. L., Degano, I., Colombini, M. P., Kjeldsen, F. & van der Plicht, J., 2017, I : Radiocarbon: An International Journal of Cosmogenic Isotope Research. 59, 5, s. 1425-1433

Publikation: Bidrag til tidsskriftKonferenceartikelForskningpeer review

ergosterol
biomarker
chemical analysis
gas chromatography
agriculture

Toxicological interactions of silver nanoparticles and non-essential metals in human hepatocarcinoma cell line

Miranda, R. R., Bezerra, A. G., Ribeiro, C. A. O., Randi, M. A. F., Voigt, C. L., Skytte, L., Rasmussen, K. L., Kjeldsen, F. & Neto, F. F., 2017, I : Toxicology in Vitro. 40, s. 134–143

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

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Silver
Assays
Metals
Cells
Nanoparticles
80 Downloads (Pure)

Uranyl Photocleavage of Phosphopeptides Yields Truncated C-Terminally Amidated Peptide Products

Elnegaard, R. L. B., Møllegaard, N. E., Zhang, Q., Kjeldsen, F. & Jørgensen, T. J. D., 2017, I : ChemBioChem. 18, 12, s. 1117-1122

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Phosphopeptides
Peptides
Ultraviolet Rays
Tandem Mass Spectrometry
Caseins
2016

High-performance hybrid Orbitrap mass spectrometers for quantitative proteome analysis: Observations and implications

Williamson, J. C., Edwards, A. V. G., Verano-Braga, T., Schwämmle, V., Kjeldsen, F., Jensen, O. N. & Larsen, M. R., mar. 2016, I : Proteomics. 16, 6, s. 907-914

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

Heat-Shock Response
Mass spectrometers
Proteome
Ions
Isotope Labeling
140 Downloads (Pure)

Peptide de novo sequencing of mixture tandem mass spectra

Gorshkov, V., Hotta, S. Y. K., Braga, T. V. & Kjeldsen, F., 19. sep. 2016, I : Proteomics. 16, 18, s. 2470-2479

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Deconvolution
Peptides
Ions
Search Engine
Search engines
2015
84 Downloads (Pure)

Charge Inversion of Phospholipids by Dimetal Complexes for Positive Ion-Mode Electrospray Ionization Mass Spectrometry Analysis

Svane, S., Gorshkov, V. & Kjeldsen, F., 1. sep. 2015, I : Analytical Chemistry. 87, 17, s. 8732-8739

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Electrospray ionization
Mass spectrometry
Phospholipids
Phosphatidylinositols
Positive ions
97 Downloads (Pure)

Effect of Metals in Biomimetic Dimetal Complexes on Affinity and Gas-Phase Protection of Phosphate Esters

Svane, S., Jørgensen, T. J. D., McKenzie, C. & Kjeldsen, F., 2015, I : Analytical Chemistry. 87, 14, s. 7060–7068

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Extending the Quantitative Information of the Glioblastoma Proteome Using SuperQuant

Kjeldsen, F., 28. sep. 2015.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskning

91 Downloads (Pure)

SuperQuant: a Data Processing Approach to Increase Quantitative Proteome Coverage

Gorshkov, V., Verano-Braga, T. & Kjeldsen, F., 15. maj 2015, I : Analytical Chemistry. 87, 12, s. 6319–6327

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

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Proteome
Peptides
Ions
Data recording
Proteins

The Selectivity of Water-based Pyrophosphate Recognition is Tuned by Metal Substitution in Dimetallic Receptors

Svane, S., Kjeldsen, F., McKee, V. & McKenzie, C., 2015, I : Dalton Transactions (Print Edition). 44, 26, s. 11877-11886

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

2014

Exposure to silver nanoparticles induces size- and dose-dependent oxidative stress and cytotoxicity in human colon carcinoma cells

Miethling-Graff, R., Rumpker, R., Richter, M., Verano-Braga, T., Kjeldsen, F., Brewer, J. R., Hoyland, J., Rubahn, H-G. & Erdmann, H., 2014, I : Toxicology in Vitro. 28, 7, s. 1280–1289

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

Oxidative stress
Intestinal Mucosa
Cytotoxicity
Silver
Particle Size

Insights into the Cellular Response Triggered by Silver Nanoparticles using Quantitative Proteomics

Verano-Braga, T., Miethling-Graff, R., Wojdyla, K. I., Rogowska-Wrzesinska, A., Brewer, J. R., Erdmann, H. & Kjeldsen, F., 2014, I : A C S Nano. 8, 3, s. 2161–2175

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

N-terminal sequence tagging using reliably determined b2 ions: A useful approach to deconvolute tandem mass spectra of co-fragmented peptides in proteomics

Kryuchkov, F., Verano-Braga, T. & Kjeldsen, F., 2014, I : Journal of Proteomics. 103, May, s. 254–260

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

Q-Exactive Plus and Orbitrap Fusion: Determination of optimal settings for peptide and phosphopeptide identification

Verano-Braga, T., Williamson, J., Edwards, A., Jensen, O. N., Kjeldsen, F. & Larsen, M. R., 2014.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskningpeer review

Qualitative and Quantitative Comparison of Q Exactive Plus and Orbitrap Fusion for Label Free and Isobaric Tag Based Quantification

Williamson, J., Verano-Braga, T., Edwards, A., Kjeldsen, F., Larsen, M. R. & Jensen, O. N., 2014.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskningpeer review

2013

Application of complementary ions to identify co-isolated peptides in complex samples

Kjeldsen, F., Hansen, T. A., Verano-Braga, T., Sprenger, R. R. & Kryuchkov, F., 12. jun. 2013.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskningpeer review

Deconvolution of mixture spectra and increased throughput of Peptide identification by utilization of intensified complementary ions formed in tandem mass spectrometry

Kryuchkov, F., Verano-Braga, T., Hansen, T. A., Sprenger, R. R. & Kjeldsen, F., 3. jun. 2013, I : Journal of Proteome Research. 12, 7, s. 3362–3371

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

Deconvolution
Tandem Mass Spectrometry
Mass spectrometry
Computer aided design
Throughput

Discovery and Characterization of Alamandine, a Novel Component of the Renin-Angiotensin System

Lautner, R. Q., Villela, D. C., Fraga-Silva, R. A., Silva, N. C., Verano-Braga, T., Costa-Fraga, F., Jankowski, J., Jankowski, V., De Sousa, F. B., Alzamora, A. C., Soares, E. R., Barbosa, C. M., Kjeldsen, F., Oliveira, A. C., Braga, J. F., Savergnini, S. Q., Etelvino, G. M., Peluso, A. A. B., Passos-Silva, D. G., Ferreira, A. J. & 12 flere, Alves, F., Martins, A. S., Raizada, M. K., Paula, R. D., Motta-Santos, D., Klempin, F., Pimenta, A. M. C., Alenina, N., Sinisterra, R. D. M., Bader, M., Campagnole-Santos, M. J. & Santos, R. A., 2013, I : Circulation Research. 112, 8, s. 1104-1111 8 s.

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

Renin-Angiotensin System
Inbred SHR Rats
G-Protein-Coupled Receptors
Isoproterenol
Vasodilation

Moving pieces in a venomic puzzle: unveiling post-translationally modified toxins from Tityus serrulatus

Verano-Braga, T., Dutra, A. A. A., León, I. R., Melo-Braga, M. N., Roepstorff, P., Pimenta, A. M. C. & Kjeldsen, F., 5. jul. 2013, I : Journal of Proteome Research. 12, 7, s. 3460-70 11 s.

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

Venoms
Peptides
Scorpion Venoms
Proteolysis
Molecules

New insights into the cellular response triggered by silver nanoparticles using quantitative proteomics

Verano-Braga, T., Miethling-Graff, R., Wojdyla, K. I., Rogowska-Wrzesinska, A., Brewer, J. R., Erdmann, H. & Kjeldsen, F., 2013.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskning

The proteomic profile of Stichodactyla duerdeni secretion reveals the presence of a novel O-linked glycopeptide

Cassoli, J. S., Verano-Braga, T., Oliveira, J. S., Montandon, G. G., Cologna, C. T., Peigneur, S., Pimenta, A. M. D. C., Kjeldsen, F., Roepstorff, P., Tytgat, J. & de Lima, M. E., 2013, I : Journal of Proteomics. 87, s. 89-102

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

Sea Anemones
Glycopeptides
Peptides
Matrix-Assisted Laser Desorption-Ionization Mass Spectrometry
Animals

Utilization of a2/b2 ions as a filter of peptide candidates prior to database searching and identification of isobaric co-isolated peptides

Kryuchkov, F., Verano-Braga, T. & Kjeldsen, F., 9. jun. 2013.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskningpeer review

2012

Automated and high confidence protein phosphorylation site localization using complementary collision-activated dissociation and electron transfer dissociation tandem mass spectrometry

Hansen, T. A., Sylvester, M., Jensen, O. N. & Kjeldsen, F., 20. nov. 2012, I : Analytical Chemistry. 84, 22, s. 9694-9699 6 s.

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

Phosphorylation
Mass spectrometry
Electrons
Proteins
Phosphopeptides

Highlighting Reliable Peptide Fragment Ions for Database Searching using Intensified Golden Complementary Ion Pairs

Kryuchkov, F., Hansen, T. A., Verano-Braga, T. & Kjeldsen, F., 22. maj 2012.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskningpeer review

Overcoming the Instability of Gaseous Peptide Phosphate Ester Groups by Dimetal Protection

Bidragets oversatte titel: Overcoming the Instability of Gaseous Peptide Phosphate Ester Groups by Dimetal ProtectionSvane, S., Kryuchkov, F., Lennartson, A., McKenzie, C. J. & Kjeldsen, F., 2012, I : Angewandte Chemie International Edition. 51, 13, s. 3216-3219

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

Reduction in Database Search Space by Utilization of Amino Acid Composition Information from Electron Transfer Dissociation and Higher-Energy Collisional Dissociation Mass Spectra

Hansen, T. A., Kryuchkov, F. & Kjeldsen, F., 2012, I : Analytical Chemistry. 84, s. 6638-6645 7 s.

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

2011

An Interregional and Interdisciplinary Joint Venture for Comprehensive Characterization of Nanoparticles and their Cellular Effect on Human Cell Lines.

Kjeldsen, F., Braga, T. V., Rubahn, H-G., Hoyland, J., Balzer, F. & Schiek, M., 23. maj 2011.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskning

69 Downloads (Pure)

Clickers – en Genvej til Øget Opmærksomhed: Pædagogisk udviklingsprojekt ved Universitetspædagogikum 2010

Kjeldsen, F., 9. jun. 2011.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskning

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