Publikationer 1994 2019

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Tidsskriftartikel
2015
99 Downloads (Pure)

Selective chemical binding enhances cesium tolerance in plants through inhibition of cesium uptake

Adams, E., Chaban, V., Khandelia, H. & Shin, R., 2015, I : Scientific Reports. 5, s. 8842

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Cesium
Arabidopsis
Ions
Growth
107 Downloads (Pure)

SIMP model at NNLO in chiral perturbation theory

Hansen, M. R. L., Langaeble, K. & Sannino, F., 2015, I : Physical Review D (Particles, Fields, Gravitation and Cosmology). 92, 7, 8 s., 075036.

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viability
perturbation theory
dark matter
pions
sectors

Solvent driving force ensures fast formation of a persistent and well-separated radical pair in plant cryptochrome

Lüdemann, G., Solov'yov, I., Kubar, T. & Elstner, M., 2015, I : Journal of the American Chemical Society. 137, s. 1147-1156

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Cryptochromes
Electrons
Proteins
Deoxyribodipyrimidine Photo-Lyase
Magnetic fields
95 Downloads (Pure)

Stochastic thermodynamics of a tagged particle within a harmonic chain

Lacoste, D. & Lomholt, M. A., 2015, I : Physical Review E. 91, 2, 15 s., 022114.

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84 Downloads (Pure)

Strangeness of the nucleon from lattice QCD

Alexandrou, C., Constantinou, M., Dinter, S., Drach, V., Hadjiyiannakou, K., Jansen, K., Koutsou, G., Vaquero, A. & Collaboration, E. T. M., 2015, I : Physical Review D (Particles, Fields, Gravitation and Cosmology). 91, 9, 6 s., 094503.

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162 Downloads (Pure)

Supersymmetric asymptotic safety is not guaranteed

Intriligator, K. & Sannino, F., 5. nov. 2015, I : Journal of High Energy Physics (Online). 11, 14 s., 23.

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safety
theorems
perturbation theory
degrees of freedom

The chemistry of Coulomb blockade diamonds for 1,4-diamino benzene

Olsen, S. T., Hansen, T., Kongsted, J. & Mikkelsen, K. V., 2015, I : Chemical Physics. 459, s. 40-44

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The effects of globotriaosylceramide tail saturation level on bilayer phases

Pezeshkian, W., Chaban, V. V., Johannes, L., Shillcock, J., Ipsen, J. H. & Khandelia, H., 4. feb. 2015, I : Soft Matter. 11, 7, s. 1352-61 10 s.

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Shiga Toxin
Phase behavior
lipids
saturation
Lipids
110 Downloads (Pure)

The N Terminus of Sarcolipin Plays an Important Role in Uncoupling Sarco-endoplasmic Reticulum Ca2+-ATPase (SERCA) ATP Hydrolysis from Ca2+ Transport

Sahoo, S. K., Shaikh, S. A., Sopariwala, D. H., Bal, N. C., Bruhn, D. S., Kopec, W., Khandelia, H. & Periasamy, M., 2015, I : Journal of Biological Chemistry. 290, 22, s. 14057-67

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Sarcoplasmic Reticulum Calcium-Transporting ATPases
Hydrolysis
Adenosine Triphosphate
sarcolipin
phospholamban
138 Downloads (Pure)

Theoretical study on ThF+, a prospective system in search of time-reversal violation

Denis, M., Norby, M. S., Jensen, H. J. A., Gomes, A. S. P., Nayak, M. K., Knecht, S. & Fleig, T., 1. apr. 2015, I : New Journal of Physics. 17, 043005.

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dipole moments
interactions
electric moments
electric dipoles
configuration interaction
108 Downloads (Pure)

Theory and Phenomenology of the Elementary Goldstone Higgs

Gertov, H., Meroni, A., Molinaro, E. & Sannino, F., 3. nov. 2015, I : Physical Review D (Particles, Fields, Gravitation and Cosmology). 92, 22 s., 095003 .

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phenomenology
sectors
electroweak model
numerical analysis
broken symmetry
107 Downloads (Pure)

Thermodynamics of asymptotically safe theories

Rischke, D. H. & Sannino, F., 18. sep. 2015, I : Physical Review D (Particles, Fields, Gravitation and Cosmology). 92, 13 s., 065014.

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thermodynamics
thermodynamic properties
degrees of freedom
fermions
entropy

The thiocyanate anion is a primary driver of carbon dioxide capture by ionic liquids

Chaban, V., 2015, I : Chemical Physics Letters. 618, s. 89-93

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86 Downloads (Pure)

Uniform asymptotic properties of a nonparametric regression estimator of conditional tails

Goegebeur, Y., Guillou, A. & Stupfler, G., 2015, I : Annales de l'Institut Henri Poincaré, Probabilités et Statistiques. 51, 3, s. 1190-1213

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2014

Accelerating all-atom MD simulations of lipids using a modified virtual-sites technique

Loubet, B., Kopec, W. & Khandelia, H., 9. dec. 2014, I : Journal of Chemical Theory and Computation. 10, 12, s. 5690-5695

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Lipid bilayers
Lipids
lipids
Atoms
Membrane Lipids

Ageing single file motion

Metzler, R., Sanders, L., Lomholt, M. A., Lizana, L., Fogelmark, K. & Ambjornsson, T., 2014, I : European Physical Journal. Special Topics. 223, 14, s. 3287-3293

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A Highly Viscous Imidazolium Ionic Liquid inside Carbon Nanotubes

Ohba, T. & Chaban, V. V., 2014, I : Journal of Physical Chemistry B. 118, 23, s. 6234-6240 7 s.

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A local moment type estimator for the extreme value index in regression with random covariates

Goegebeur, Y., Guillou, A. & Osmann, M., 2014, I : Canadian Journal of Statistics. 42, 3, s. 487-507

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167 Downloads (Pure)

Asymptotic safety guaranteed

Litim, D. F. & Sannino, F., dec. 2014, I : Journal of High Energy Physics (Online). 2014, 178.

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safety
perturbation theory
fermions
scalars

Atomistic Force Field for Pyridinium-Based Ionic Liquids: Reliable Transport Properties

Bidragets oversatte titel: Atomistic Force Field for Pyridinium-Based Ionic Liquids: Reliable Transport PropertiesVoroshylova, I. V. & Chaban, V. V., 2014, I : Journal of Physical Chemistry B. 118, 36, s. 10716-10724

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Atomistic Monte Carlo simulation of lipid membranes

Wüstner, D. & Sklenar, H., 24. jan. 2014, I : International Journal of Molecular Sciences. 15, 2, s. 1767-803 37 s., ijms15021767.

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lipids
membranes
Monte Carlo method
simulation
closures

BacillusRegNet: a transcriptional regulation database and analysis platform for Bacillus species

Misirli, G., Hallinan, J., Röttger, R., Baumbach, J. & Wipat, A., 2014, I : Journal of Integrative Bioinformatics. 11, 2, s. 244

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Databases
Data Curation
Datasets

Baryon spectrum with Nƒ=2+1+1 twisted mass fermions

Alexandrou, C., Drach, V., Jansen, K., Kallidonis, C. & Koutsou, G., 2014, I : Physical Review D (Particles, Fields, Gravitation and Cosmology). 90, 7, 29 s., 074501.

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Basis Set Error Estimation for DFT Calculations of Electronic g-Tensors for Transition Metal Complexes

Pedersen, M. N., Hedegård, E. D. & Kongsted, J., 2014, I : Journal of Computational Chemistry. 35, 25, s. 1809-1814 6 s.

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Bi-Force: large-scale bicluster editing and its application to gene expression data biclustering

Sun, P., Speicher, N. K., Röttger, R., Guo, J. & Baumbach, J., 2014, I : Nucleic Acids Research. 42, 9, s. e78

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Cluster Analysis
Gene Ontology
Explosions
Computational Biology
Research

Binding Free Energy Based Structural Dynamics Analysis of HIV-1 RT RNase H-Inhibitor Complexes

Poongavanam, V., Olsen, J. M. H. & Kongsted, J., 2014, I : Integrative Biology. 6, s. 1010-1022

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Chelation-induced quenching of two-photon absorption properties of azacrown ether substituted distyryl benzen for magnesium ion sensing

Murugan, N. A., Zalesny, ., Kongsted, J. & Ågren, H., 2014, I : Journal of Chemical Theory and Computation. 10, 2, s. 778-788

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Chronic exposure to odorous chemicals in residential areas and effects on human psychosocial health: Dose-response relationships

Blanes-Vidal, V., Bælum, J., S. Nadimi, E., Løfstrøm, P. & Christensen, L. P., 2014, I : Science of the Total Environment. 490, s. 545-554 10 s.

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Classification of Breast Cancer Subtypes by combining Gene Expression and DNA Methylation Data

List, M., Hauschild, A-C., Tan, Q., Kruse, T. A., Mollenhauer, J., Baumbach, J. & Batra, R., jun. 2014, I : Journal of Integrative Bioinformatics. 11, 2, s. 236

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DNA Methylation
Epigenomics
Gene Expression Profiling
Databases
127 Downloads (Pure)

Composite (Goldstone) Higgs Dynamics on the Lattice: Spectrum of SU(2) Gauge Theory with two Fundamental Fermions

Arthur, R., Drach, V., Hansen, M. R. L., Hietanen, A., Lewis, R., Pica, C. & Sannino, F., 23. dec. 2014, I : P o S - Proceedings of Science. 6 s., 249.

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gauge theory
mesons
fermions
scalars
composite materials

Computational assigment of redox states to Coulomb blockade diamonds

Olsen, S. T., Arciasauskaite, V., Hansen, T., Kongsted, J. & Mikkelsen, K. V., 2014, I : Physical Chemistry Chemical Physics. 16, s. 17473

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Computational Integrative Biology--on the joint analysis of diverse biological data sets

Baumbach, J. & Röttger, R., 2014, I : Integrative Biology. 6, 11, s. 1008-9

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Computationally efficient prediction of area per lipid

Chaban, V. V., 2014, I : Chemical Physics Letters. 616-617, s. 25-29

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Computationally Efficient Prediction of Ionic Liquid Properties

Chaban, V. V. & Prezhdo, O. V., 2014, I : The Journal of Physical Chemistry Letters. 5, 11, s. 1973-1977

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Conformal Behavior at Four Loops and Scheme (In)Dependence

Bidragets oversatte titel: Conformal Behavior at Four Loops and Scheme (In)DependenceRyttov, T., 25. sep. 2014, I : Physical Review D (Particles, Fields, Gravitation and Cosmology). 056007 .

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155 Downloads (Pure)

Conformal Extensions of the Standard Model with Veltman Conditions

Antipin, O., Mojaza, M. & Sannino, F., 7. apr. 2014, I : Physical Review D (Particles, Fields, Gravitation and Cosmology). 89, April, 085015.

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scalars
bosons

Current breathomics-a review on data pre-processing techniques and machine learning in metabolomics breath analysis

Smolinska, A., Hauschild, A. C., Fijten, R. R. R., Dallinga, J. W., Baumbach, J. & van Schooten, F. J., 2014, I : Journal of Breath Research. 8, 2, s. 20

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Decay constants of B-mesons from non-perturbative HQET with two light dynamical quarks

Bernardoni, F., Blossier, B., Bulava, J., Della Morte, M., Fritzsch, P., Garron, N., Gérardin, A., Heitger, J., von Hippel, G., Simma, H. & Sommer, R., 2014, I : Physics Letters B: Particle Physics, Nuclear Physics and Cosmology. 735, s. 349-356

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mesons
quarks
decay
pions
systematic errors

Dehydroergosterol as an analogue for cholesterol: Why it mimics cholesterol so well?

Pourmosa, M., Rog, T., Mikkeli, R., Vattulaien, I., Solanko, L. M., Wüstner, D., List, N. H., Kongsted, J. & Karttunen, M., 2014, I : Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical. 118, s. 7345

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Distribution of neutral lipids in the lipid droplet core

Chaban, V. V. & Khandelia, H., 25. sep. 2014, I : Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical. 118, 38, s. 11145-51 7 s.

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Lipids
lipids
Triolein
Cholesterol Esters
esters

Does the Like Dissolves Like Rule Hold for Fullerene and Ionic Liquids?

Chaban, V. V., Maciel, C. & Fileti, E. E., 2014, I : Journal of Solution Chemistry. 43, 6, s. 1019-1031

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Dual Mechanism of HIV-1 Integrase and RNase H Inhibition by Diketo Derivatives – A Computational Study

Poongavanam, V., Moorthy, NSH. & Kongsted, J., 11. aug. 2014, I : R S C Advances. 4, s. 38672-38681

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Efficient 3D Kinetic Monte Carlo Method for Modeling of Molecular Structure and Dynamics

Panshenskov, M., Solov'yov, I. & Solov'yov, A. V., 2014, I : Journal of Computational Chemistry. 35, s. 1317-1329 13 s.

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Kinetic Monte Carlo
Self-assembly
Self-organization
Monte Carlo method
Self assembly

Efficient Sample Tracking With OpenLabFramework

List, M., Schmidt, S., Trojnar, J., Thomas, J., Thomassen, M., Kruse, T. A., Tan, Q., Baumbach, J. & Mollenhauer, J., mar. 2014, I : Scientific Reports. 4, 4278.

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Clinical Laboratory Information Systems
Information Management
Libraries
Biomedical Research
Clone Cells

Elucidation of epithelial-mesenchymal transition-related pathways in a triple-negative breast cancer cell line model by multi-omics interactome analysis

Pauling, J. K., Christensen, A. G., Batra, R., Alcaraz, N., Barbosa, E., Larsen, M. R., Beck, H. C., Leth-Larsen, R., Azevedo, V., Ditzel, H. J. & Baumbach, J., 15. aug. 2014, I : Integrative Biology. 6, 11, s. 1058-1068

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Cells
Phosphorylation
Cell Line
Zyxin
Proteins
250 Downloads (Pure)

Fundamental Composite (Goldstone) Higgs Dynamics

Cacciapaglia, G. & Sannino, F., 16. apr. 2014, I : Journal of High Energy Physics (JHEP). 111.

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composite materials
gauge theory
physics
phenomenology
condensates
167 Downloads (Pure)

Fundamental Composite Higgs Dynamics on the Lattice: SU(2) with Two Flavors

Hietanen, A., Lewis, R., Pica, C. & Sannino, F., 23. jul. 2014, I : Journal of High Energy Physics (JHEP). 116

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composite materials
condensates
gauge theory
broken symmetry
bosons

Identifying the Hamiltonian structure in linear response theory

List, N. H., Coriani, S., Christiansen, O. & Kongsted, J., 2014, I : Journal of Chemical Physics. 140, s. 224103

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113 Downloads (Pure)

Infrared Fixed Points in the minimal MOM Scheme

Bidragets oversatte titel: Infrared Fixed Points in the minimal MOM SchemeRyttov, T., 5. mar. 2014, I : Physical Review D (Particles, Fields, Gravitation and Cosmology). 89, 056001.

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Inhibitor Ranking Through QM based Chelation Calculations for Virtual Screening of HIV-1 RNase H inhibition

Poongavanam, V., Svendsen, C. S. & Kongsted, J., 2014, I : PLOS ONE. 9, 6, 11 s.

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Ribonuclease H
chelation
Chelation
Human immunodeficiency virus 1
HIV-1