Publikationer 1994 2019

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Tidsskriftartikel
2015

Relation between nonlinear optical properties of push-pull molecules and metric of charge transfer excitations

List, N. H., Zalesny, R., Murugan, N. A., Kongsted, J., Bartkowiak, W. & Ågren, H., 2015, I : Journal of Chemical Theory and Computation. 11, 9, s. 4182-4188

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Robust conditional Weibull-type estimation

Goegebeur, Y., Guillou, A. & Rietsch, T., 2015, I : Annals of the Institute of Statistical Mathematics. 67, 3, s. 479-514

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Se ind i maden

Christensen, M., Clausen, M. P. & Mouritsen, O. G., 2015, I : Aktuel Naturvidenskab. 6, s. 22-27

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99 Downloads (Pure)

Selective chemical binding enhances cesium tolerance in plants through inhibition of cesium uptake

Adams, E., Chaban, V., Khandelia, H. & Shin, R., 2015, I : Scientific Reports. 5, s. 8842

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Cesium
Arabidopsis
Ions
Growth
107 Downloads (Pure)

SIMP model at NNLO in chiral perturbation theory

Hansen, M. R. L., Langaeble, K. & Sannino, F., 2015, I : Physical Review D (Particles, Fields, Gravitation and Cosmology). 92, 7, 8 s., 075036.

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viability
perturbation theory
dark matter
pions
sectors

Solvent driving force ensures fast formation of a persistent and well-separated radical pair in plant cryptochrome

Lüdemann, G., Solov'yov, I., Kubar, T. & Elstner, M., 2015, I : Journal of the American Chemical Society. 137, s. 1147-1156

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Cryptochromes
Electrons
Proteins
Deoxyribodipyrimidine Photo-Lyase
Magnetic fields
91 Downloads (Pure)

Stochastic thermodynamics of a tagged particle within a harmonic chain

Lacoste, D. & Lomholt, M. A., 2015, I : Physical Review E. 91, 2, 15 s., 022114.

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84 Downloads (Pure)

Strangeness of the nucleon from lattice QCD

Alexandrou, C., Constantinou, M., Dinter, S., Drach, V., Hadjiyiannakou, K., Jansen, K., Koutsou, G., Vaquero, A. & Collaboration, E. T. M., 2015, I : Physical Review D (Particles, Fields, Gravitation and Cosmology). 91, 9, 6 s., 094503.

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159 Downloads (Pure)

Supersymmetric asymptotic safety is not guaranteed

Intriligator, K. & Sannino, F., 5. nov. 2015, I : Journal of High Energy Physics (Online). 11, 14 s., 23.

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safety
theorems
perturbation theory
degrees of freedom

The chemistry of Coulomb blockade diamonds for 1,4-diamino benzene

Olsen, S. T., Hansen, T., Kongsted, J. & Mikkelsen, K. V., 2015, I : Chemical Physics. 459, s. 40-44

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The effects of globotriaosylceramide tail saturation level on bilayer phases

Pezeshkian, W., Chaban, V. V., Johannes, L., Shillcock, J., Ipsen, J. H. & Khandelia, H., 4. feb. 2015, I : Soft Matter. 11, 7, s. 1352-61 10 s.

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Shiga Toxin
Phase behavior
lipids
saturation
Lipids
110 Downloads (Pure)

The N Terminus of Sarcolipin Plays an Important Role in Uncoupling Sarco-endoplasmic Reticulum Ca2+-ATPase (SERCA) ATP Hydrolysis from Ca2+ Transport

Sahoo, S. K., Shaikh, S. A., Sopariwala, D. H., Bal, N. C., Bruhn, D. S., Kopec, W., Khandelia, H. & Periasamy, M., 2015, I : Journal of Biological Chemistry. 290, 22, s. 14057-67

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Sarcoplasmic Reticulum Calcium-Transporting ATPases
Hydrolysis
Adenosine Triphosphate
sarcolipin
phospholamban
138 Downloads (Pure)

Theoretical study on ThF+, a prospective system in search of time-reversal violation

Denis, M., Norby, M. S., Jensen, H. J. A., Gomes, A. S. P., Nayak, M. K., Knecht, S. & Fleig, T., 1. apr. 2015, I : New Journal of Physics. 17, 043005.

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dipole moments
interactions
electric moments
electric dipoles
configuration interaction
108 Downloads (Pure)

Theory and Phenomenology of the Elementary Goldstone Higgs

Gertov, H., Meroni, A., Molinaro, E. & Sannino, F., 3. nov. 2015, I : Physical Review D (Particles, Fields, Gravitation and Cosmology). 92, 22 s., 095003 .

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phenomenology
sectors
electroweak model
numerical analysis
broken symmetry
105 Downloads (Pure)

Thermodynamics of asymptotically safe theories

Rischke, D. H. & Sannino, F., 18. sep. 2015, I : Physical Review D (Particles, Fields, Gravitation and Cosmology). 92, 13 s., 065014.

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thermodynamics
thermodynamic properties
degrees of freedom
fermions
entropy

The thiocyanate anion is a primary driver of carbon dioxide capture by ionic liquids

Chaban, V., 2015, I : Chemical Physics Letters. 618, s. 89-93

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86 Downloads (Pure)

Uniform asymptotic properties of a nonparametric regression estimator of conditional tails

Goegebeur, Y., Guillou, A. & Stupfler, G., 2015, I : Annales de l'Institut Henri Poincaré, Probabilités et Statistiques. 51, 3, s. 1190-1213

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2016
140 Downloads (Pure)

A comparative study on fluorescent cholesterol analogs as versatile cellular reporters

Sezgin, E., Betul Can, F., Schneider, F., Clausen, M. P., Galiani, S., Stanly, T. A., Waithe, D., Colaco, A., Honigmann, A., Wüstner, D., Platt, F. & Eggeling, C., 2016, I : Journal of Lipid Research. 57, s. 299-309

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Cholesterol
Membranes
Assays
Cell membranes
Fluorescence
175 Downloads (Pure)

Asymptotically Safe Grand Unification

Bajc, B. & Sannino, F., 2016, I : The Journal of High Energy Physics (Online). 2016, s. 1-20 141.

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grand unified theory
phenomenology
poles
theorems
inclusions

Averaged Solvent Embedding Potential Parameters for Multiscale Modeling of Molecular Properties

Beerepoot, M., Steindal, A. H., List, N. H., Kongsted, J. & Olsen, J. M. H., mar. 2016, I : Journal of Chemical Theory and Computation. 12, 4, s. 1684-1695

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molecular properties
embedding
Molecules
Molecular mechanics
Geometry

Binding affinity models for Falcipain inhibition based on the Linear Interaction Energy method

Poongavanam, V. & Kongsted, J., 2016, I : Journal of Molecular Graphics and Modelling. 70, s. 236-245

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184 Downloads (Pure)

Collider Tests of (Composite) Diphoton Resonances

Molinaro, E., Sannino, F. & Vignaroli, N., okt. 2016, I : Nuclear Physics, Section B. 911, s. 106-126

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composite materials
sectors
operators
broken symmetry
fusion
116 Downloads (Pure)

Comprehensive analysis of high-throughput screens with HiTSeekR

List, M., Schmidt, S., Christiansen, H., Rehmsmeier, M., Tan, Q., Mollenhauer, J. & Baumbach, J., 2016, I : Nucleic Acids Research. 44, 14, s. 6639-6648

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MicroRNAs
Small Interfering RNA
Clustered Regularly Interspaced Short Palindromic Repeats
Systems Biology
RNA Interference

Computational Approach for Studying Optical Properties of DNA Systems in Solution

Nørby, M. S., Svendsen, C. S., Olsen, J. M. H., Li, H. & Kongsted, J., 2016, I : Journal of Chemical Theory and Computation. 12, 10, s. 5050-5057

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DNA
deoxyribonucleic acid
Optical properties
optical properties
embedding
167 Downloads (Pure)

Conformal Gauge-Yukawa Theories away From Four Dimensions

Codello, A., Langaeble, K., Litim, D. & Sannino, F., jul. 2016, I : The Journal of High Energy Physics (Online). July 2016, 7, s. 1-14 118.

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scalars
phase diagrams
quantum chromodynamics
fermions
interactions
106 Downloads (Pure)

Cultural evolution as a nonstationary stochastic process

Nicholson, A. & Sibani, P., 2016, I : Complexity (Print). 21, 6, s. 214-223

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CytoGEDEVO: Global alignment of biological networks with Cytoscape

Malek, M., Ibragimov, R., Albrecht, M. & Baumbach, J., 2016, I : Bioinformatics. 32, 8, s. 1259-1261

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Proteins
Documentation
Protein Interaction Maps
Systems Biology
Computational Biology

Differentially Methylated Genomic Regions in Birth-Weight Discordant Twin Pairs

Chen, M., Baumbach, J., Vandin, F., Röttger, R., Vieira Barbosa, E. G., Dong, M., Nielsen, M. F. M., Christiansen, L. & Tan, Q., 2016, I : Annals of Human Genetics. 80, 2, s. 81-87

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DNA Methylation
Epigenomics
Monozygotic Twins
Chromosomes, Human, Pair 1
Health

Discrete dispersion models and their Tweedie asymptotics

Jørgensen, B. & Kokonendji, C. C., 2016, I : A St A - Advances in Statistical Analysis. 100, 1, s. 43-78

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Effect of fatty acids on the permeability barrier of model and biological membranes

Arouri, A., Lauritsen, K. E., Nielsen, H. L. & Mouritsen, O. G., 2016, I : Chemistry and Physics of Lipids. 200, s. 139-146

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149 Downloads (Pure)

Electron correlation within the relativistic no-pair approximation

Almoukhalalati, A., Knecht, S., Jensen, H. J. A., Dyall, K. G. & Saue, T., 2016, I : The Journal of Chemical Physics. 145, 7, s. 074104-1-074104-15 074104.

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Electron correlations
Hamiltonians
approximation
electrons
self consistent fields
154 Downloads (Pure)

Electron spin relaxation can enhance the performance of a cryptochrome-based magnetic compass sensor

Kattnig, D. R., Sowa, J. K., Solov'yov, I. A. & Hore, P. J., 2016, I : New Journal of Physics. 18, 063007.

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magnetic compasses
electron spin
sensors
molecular dynamics
augmentation
120 Downloads (Pure)

Electron spin relaxation in cryptochrome-based magnetoreception

Kattnig, D. R., Solov'yov, I. A. & Hore, P. J., 2016, I : Physical Chemistry Chemical Physics. 18, 18, s. 12443-12456

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Cryptochromes
electron spin
Electrons
magnetic compasses
Spin dynamics
132 Downloads (Pure)

Embedding beyond electrostatics: The role of wave function confinement

Nåbo, L. J., Olsen, J. M. H., Holmgaard List, N., Solanko, L. M., Wüstner, D. & Kongsted, J., 14. sep. 2016, I : The Journal of Chemical Physics. 145, 7 s., 104102.

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Wave functions
embedding
Electrostatics
wave functions
electrostatics
139 Downloads (Pure)

Fundamental partial compositeness

Sannino, F., Strumia, A., Tesi, A. & Vigiani, E., nov. 2016, I : The Journal of High Energy Physics (Online). 2016, 11, 29.

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fermions
scalars
composite materials
phenomenology
quantum numbers

Gastrophysics of the oral cavity

Mouritsen, O. G., 2016, I : Current Pharmaceutical Design. 22, 15, s. 2195-2203

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GIPSy: Genomic island prediction software

Soares, S. C., Geyik, H., Ramos, R. T. J., de Sá, P. H. C. G., Barbosa, E. G. V., Baumbach, J., Figueiredo, H. C. P., Miyoshi, A., Tauch, A., Silva, A. & Azevedo, V., 2016, I : Journal of Biotechnology. 232, s. 2-11

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Genomic Islands
Islands
Plasticity
Genes
Gene transfer
122 Downloads (Pure)

How Far Does a Receptor Influence Vibrational Properties of an Odorant?

Reese, A., List, N. H., Kongsted, J. & Solov'yov, I. A., 2016, I : P L o S One. 11, 3, 21 s., e0152345.

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vibrational properties
Odorant Receptors
odor compounds
Smell
smell
64 Downloads (Pure)

Infrared Zero of $β$ and Value of $γ_m$ for an SU(3) Gauge Theory at the Five-Loop Level

Ryttov, T. A. & Shrock, R., 2016, I : Physical Review D. Particles and fields. 94, 10, s. 1-5 105015.

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118 Downloads (Pure)

Inhibition of cholesterol transport in an intestine cell model by pine-derived phytosterols

Yi, J., Knudsen, T. A., Nielsen, A-L., Duelund, L., Christensen, M., Hervella, P., Needham, D. & Mouritsen, O. G., 2016, I : Chemistry and Physics of Lipids. 200, s. 63-73

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Investigation of Multiconfigurational Short-Range Density Functional Theory for Electronic Excitations in Organic Molecules

Hubert, M., Hedegård, E. D. & Jensen, H. J. A., 2016, I : Journal of Chemical Theory and Computation. 12, 5, s. 2203-2213

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Density functional theory
density functional theory
Molecules
electronics
excitation
64 Downloads (Pure)

Jllumina: A comprehensive Java-based API for statistical Illumina Infinium HumanMethylation450 and MethylationEPIC data processing

Almeida, D. M., Uhrenfeldt Skov, I., Lund, J., Mohammadnejad, A., Silva, A., Vandin, F., Tan, Q., Baumbach, J. & Röttger, R., 2016, I : Journal of Integrative Bioinformatics. 13, 4, 9 s., 294.

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Statistical Data Interpretation
Libraries
DNA Methylation
Computational Biology
Epigenomics

Kernel regression with Weibull-type tails

de Wet, T., Goegebeur, Y., Guillou, A. & Osmann, M., 2016, I : Institute of Statistical Mathematics. Annals. 68, 5, s. 1135-1162

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133 Downloads (Pure)

KeyPathwayMinerWeb: online multi-omics network enrichment

List, M., Alcaraz, N., Dissing-Hansen, M., Ditzel, H. J., Mollenhauer, J. & Baumbach, J., 2016, I : Nucleic Acids Research. 44, W1, s. W98-W104

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Protein Interaction Maps
Proteins
107 Downloads (Pure)

Large volumes and spectroscopy of walking theories

Del Debbio, L., Lucini, B., Patella, A., Pica, C. & Rago, A., 2016, I : Physical Review D (Particles, Fields, Gravitation and Cosmology). 93, 5, 13 s., 054505.

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walking
fermions
spectroscopy
sectors
spectral signatures

Local electric fields and molecular properties in heterogeneous environments through polarizable embedding

List, N. H., Jensen, H. J. A. & Kongsted, J., 2016, I : Physical Chemistry Chemical Physics. 18, 15, s. 10070-10080

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molecular properties
embedding
Electric fields
Molecules
electric fields

Mechanism of the Primary Charge Transfer Reaction in the Cytochrome bc1 Complex

Barragan, A. M., Schulten, K. & Solov'yov, I. A., 12. okt. 2016, I : The Journal of Physical Chemistry Part B. 120, 44, s. 11369-11380

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Hydroquinones
Electron Transport Complex III
cytochromes
Charge transfer
charge transfer
313 Downloads (Pure)

Membrane invagination induced by Shiga toxin B-subunit: From molecular structure to tube formation

Pezeshkian, W., Hansen, A. G., Johannes, L., Khandelia, H., Shillcock, J. C., Kumar, P. B. S. & Ipsen, J. H., 2016, I : Soft Matter. 2016, 12, s. 5164-5171

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Shiga Toxin
Clathrin
Molecular structure
molecular structure
tubes

Metagenomic evidence for the presence of phototrophic Gemmatimonadetes bacteria in diverse environments

Zeng, Y., Baumbach, J., Barbosa, E. G. V., Azevedo, V., Zhang, C. & Koblížek, M., 2016, I : Environmental Microbiology Reports. 8, 1, s. 139-149

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Metagenomics
Metagenome
bacterium
gene
bacteria
115 Downloads (Pure)

Minimal Composite Dynamics versus Axion Origin of the Diphoton excess

Molinaro, E., Sannino, F. & Vignaroli, N., 2016, I : Modern Physics Letters A. 31, 26

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composite materials
footprints
broken symmetry
sectors
deviation