Det Naturvidenskabelige Fakultet

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    5230 Odense M

Publikationer 1966 2020

2019

Philosophy of mathematical practice — Motivations, themes and prospects

Carter, J., feb. 2019, I : Philosophia Mathematica. 27, 1, s. 1-32 32 s.

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Philosophy
Epistemological
Framework

Phosphate capture by ultrathin MgAl layered double hydroxide nanoparticles

Liu, C., Zhang, M., Pan, G., Lundehøj, L., Nielsen, U. G., Shi, Y. & Hansen, H. C. B., 1. sep. 2019, I : Applied Clay Science. 177, s. 82-90

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Phosphates
Nanoparticles
Phosphorus
Urea
Sorption
96 Downloads (Pure)

Phosphoproteomic and functional analyses reveal sperm-specific protein changes downstream of kappa opioid receptor in human spermatozoa

Urizar-Arenaza, I., Osinalde, N., Akimov, V., Puglia, M., Candenas, L., Pinto, F. M., Muñoa-Hoyos, I., Gianzo, M., Matorras, R., Irazusta, J., Blagoev, B., Subiran, N. & Kratchmarova, I., 15. mar. 2019, I : Molecular and Cellular Proteomics. 18, Suppl 1, s. S118-S131

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kappa Opioid Receptor
G-Protein-Coupled Receptors
Phosphorylation
Proteins
(trans)-Isomer 3,4-Dichloro-N-methyl-N-(2-(1-pyrrolidinyl)-cyclohexyl)-benzeneacetamide

Phosphorus cycling in Lake Cadagno, Switzerland: A low sulfate euxinic ocean analogue

Xiong, Y., Guilbaud, R., Peacock, C. L., Cox, R. P., Canfield, D. E., Krom, M. D. & Poulton, S. W., 15. apr. 2019, I : Geochimica et Cosmochimica Acta. 251, s. 116-135

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sulfate
phosphorus
lake
water column
ocean

Photophysical investigation of two emissive nucleosides exhibiting gigantic stokes shifts

Stendevad, J., Hornum, M., Wüstner, D. & Kongsted, J., 17. jun. 2019, I : Photochemical and Photobiological Sciences. 18, 7, s. 1858-1865 8 s.

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Deoxycytidine
nucleosides
Nucleosides
analogs
shift
61 Downloads (Pure)

Plasmonic color printing based on third-order gap surface plasmons

Deshpande, R. A., Roberts, A. S. & Bozhevolnyi, S. I., 1. feb. 2019, I : Optical Materials Express. 9, 2, s. 717-730

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Color printing
Plasmons
Color
Gold
Resonators

Plasmonic directional couplers using channel waveguides in random arrays of metal nanoparticles

Garcia-Ortiz, C. E., Coello, V., Pisano, E., Chen, Y. & Bozhevolnyi, S. I., 2019, I : Optics Express. 27, 16, s. 22753-22763

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directional couplers
waveguides
nanoparticles
metals
composite materials
6 Downloads (Pure)

Poisonous books: analyses of four sixteenth and seventeenth century book bindings covered with arsenic rich green paint

Delbey, T., Holck, J. P., Jørgensen, B., Alvis, A., Haight Smith, V., Kavich, G. M., Harmon, K. A., Dorch, B. F. & Rasmussen, K. L., 2019, I : Heritage Science. 7, 91.

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67 Downloads (Pure)

Polarization control of colors in resonant evanescent field scattering by silicon nanodisks [Invited]

Evlyukhin, A. B. & Bozhevolnyi, S. I., 1. jan. 2019, I : Optical Materials Express. 9, 1, s. 151-161

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Evanescent fields
Silicon
Scattering
Polarization
Color

Polymorphisms in the NFkB, TNF-alpha, IL-1beta, and IL-18 pathways are associated with response to anti-TNF therapy in Danish patients with inflammatory bowel disease

The Danish IBD Genetics Working Group, apr. 2019, I : Alimentary Pharmacology and Therapeutics. 49, 7, s. 890-903

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Interleukin-18
Inflammatory Bowel Diseases
Ulcerative Colitis
Tumor Necrosis Factor-alpha
Crohn Disease

Polypyridyl-Based Copper Phenanthrene Complexes: A New Type of Stabilized Artificial Chemical Nuclease

Zuin Fantoni, N., Molphy, Z., Slator, C., Menounou, G., Toniolo, G., Mitrikas, G., McKee, V., Chatgilialoglu, C. & Kellett, A., 2019, I : Chemistry - A European Journal. 25, 1, s. 221-237 17 s.

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Copper
DNA
Intercalating Agents
DNA Repair Enzymes
Ligands

Predicting mechanical restraint of psychiatric inpatients by applying machine learning on electronic health data

Danielsen, A. A., Fenger, M. H. J., Østergaard, S. D., Nielbo, K. L. & Mors, O., aug. 2019, I : Acta Psychiatrica Scandinavica. 140, 2, s. 147-157

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Inpatients
Health
Electronic Health Records
Denmark
Area Under Curve
139 Downloads (Pure)

Predictive minds in Ouija board sessions

Andersen, M., Nielbo, K. L., Schjødt, U., Pfeiffer, T., Roepstorff, A. & Sørensen, J., jul. 2019, I : Phenomenology and the Cognitive Sciences. 18, 3, s. 577-588

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Research
Ouija Board
Sense of Agency
Letters

Preface

Houen, G., 1. jan. 2019, Autoantibodies: Methods and Protocols. Houen, G. (red.). Humana Press, s. V (Methods in Molecular Biology, Bind 1901).

Publikation: Bidrag til bog/antologi/rapport/konference-proceedingForord/efterskriftForskning

PRMT5 methylome profiling uncovers a direct link to splicing regulation in acute myeloid leukemia

Radzisheuskaya, A., Shliaha, P. V., Grinev, V., Lorenzini, E., Kovalchuk, S., Shlyueva, D., Gorshkov, V., Hendrickson, R. C., Jensen, O. N. & Helin, K., 14. okt. 2019, I : Nature Structural and Molecular Biology.

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Protein-Arginine N-Methyltransferases
Acute Myeloid Leukemia
Myeloid Cells
Essential Genes
Alternative Splicing

Probing passive transport with localized spectroscopy

Stein, P. C., 26. mar. 2019.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskning

Probing passive transport with localized spectroscopy

Stein, P. C., 14. jan. 2019.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskning

Probing Through-Space Polar−π Interactions in 2,6-Diarylphenols

Bosmans, V., Poater, J., Hammink, R., Tinnemans, P., Bickelhaupt, F. M. & Mecinović, J., 22. feb. 2019, I : The Journal of Organic Chemistry. 84, 6, s. 3632-3637

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Acidity
Phenols
Phenol
Protons

Problem solving capabilities of peach-fronted conures (Eupsittula aurea) studied with the string-pulling test

Torres Ortiz, S., Maxwell, A., Krasheninnikova, A., Wahlberg, M. & Larsen, O. N., 2019, I : Behaviour. 156, 5-8, s. 815-846

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parrots
peaches
testing
Food
birds
24 Downloads (Pure)

Proceedings of the EuBIC Winter School 2019

Kopczynski, D., Bittremieux, W., Bouyssié, D., Dorfer, V., Locard-Paulet, M., Van Puyvelde, B., Schwämmle, V., Soggiu, A., Willems, S. & Uszkoreit, J., 17. aug. 2019, I : EuPA Open Proteomics. 4 s.

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European Union
Bioinformatics
Computational Biology
Poland
Research Personnel
79 Downloads (Pure)

Protein corona formed on silver nanoparticles in blood plasma is highly selective and resistant to physicochemical changes of the solution

Gorshkov, V., Bubis, J. A., Solovyeva, E. M., Gorshkov, M. V. & Kjeldsen, F., 18. mar. 2019, I : Environmental Science: Nano. 6, 4, s. 1089-1098

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Silver
Blood
Nanoparticles
Plasmas
Hydrophobicity

Proteomic Analysis of Restored Insulin Production and Trafficking in Obese Diabetic Mouse Pancreatic Islets following Euglycemia

Kang, T., Boland, B. B., Alarcon, C., Grimsby, J. S., Rhodes, C. J. & Larsen, M. R., 6. sep. 2019, I : Journal of Proteome Research. 18, 9, s. 3245-3258

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Obese Mice
Phosphorylation
Islets of Langerhans
Insulin
Proteins
95 Downloads (Pure)

Proteomic profiling of mouse epididymosomes reveals their contributions to post-testicular sperm maturation

Nixon, B., De Iuliis, G. N., Hart, H. M., Zhou, W., Mathe, A., Bernstein, I., Anderson, A. L., Stanger, S. J., Skerrett-Byrne, D. A., Jamaluddin, M. F. B., Almazi, J. G., Bromfield, E. G., Larsen, M. R. & Dun, M. D., 15. mar. 2019, I : Molecular and Cellular Proteomics. 18, Suppl. 1, s. S91-S108

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Exosomes
Epididymis
Proteins
Genes
Zona Pellucida

Proteomic signatures of neuroinflammation in Alzheimer's disease, multiple sclerosis and ischemic stroke

Thygesen, C., Larsen, M. R. & Finsen, B., jul. 2019, I : Expert Review of Proteomics. 16, 7, s. 601-611

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Alzheimer Disease
Cerebrospinal fluid
Proteins
Cerebrospinal Fluid
Myeloid Cells

Proteomics insights into the responses of Saccharomyces cerevisiae during mixed-culture alcoholic fermentation with Lachancea thermotolerans

Peng, C., Andersen, B., Arshid, S., Larsen, M. R., Albergaria, H., Lametsch, R. & Arneborg, N., sep. 2019, I : FEMS Microbiology Ecology. 95, 9, 16 s.

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proteomics
Fermentation
fermentation
Saccharomyces cerevisiae
protein

Proterozoic seawater sulfate scarcity and the evolution of ocean–atmosphere chemistry

Fakhraee, M., Hancisse, O., Canfield, D. E., Crowe, S. A. & Katsev, S., 22. apr. 2019, I : Nature Geoscience. 12, MAY, s. 375–380

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Proterozoic
sulfate
seawater
oxygen
methane
52 Downloads (Pure)

PubMed coverage varied across specialties and over time: a large-scale study of included studies in Cochrane reviews

Frandsen, T. F., Eriksen, M. B., Hammer, D. M. G. & Christensen, J. B., aug. 2019, I : Journal of Clinical Epidemiology. 112, s. 59-66

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PubMed
Databases
Publications
Confidence Intervals
Population

Quantification of Cholesterol and Cholesteryl Ester by Direct Flow Injection High-Resolution Fourier Transform Mass Spectrometry Utilizing Species-Specific Response Factors

Höring, M., Ejsing, C. S., Hermansson, M. & Liebisch, G., 2019, I : Analytical Chemistry. 91, 5, s. 3459–3466

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Cholesterol Esters
Mass spectrometry
Fourier transforms
Electrospray ionization
Lipids

Quantitative analysis of ergosterol transport across the yeast plasma membrane.

Wüstner, D., 2019.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskningpeer review

Rab35 controls cilium length, function and membrane composition

Kuhns, S., Seixas, C., Pestana, S., Tavares, B., Nogueira, R., Jacinto, R., Ramalho, J. S., Simpson, J. C., Andersen, J. S., Echard, A., Lopes, S. S., Barral, D. C. & Blacque, O. E., 4. okt. 2019, I : EMBO Reports. 20, 10, 23 s., e47625.

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Cilia
Hedgehogs
Membranes
GTP-Binding Proteins
Chemical analysis

Raising your voice: Evolution of narrow-band high-frequency signals in toothed whales (Odontoceti)

Galatius, A., Olsen, M. T., Steeman, M. E., Racicot, R. A., Bradshaw, C. D., Kyhn, L. A. & Miller, L. A., 18. jan. 2019, I : Biological Journal of the Linnean Society. 126, 2, s. 213-224

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whales
whale
crypsis
convergent evolution
cetacean
82 Downloads (Pure)

Rapid Generation of Long Noncoding RNA Knockout Mice Using CRISPR/Cas9 Technology

Hansmeier, N. R., Widdershooven, P. J. M., Khani, S. & Kornfeld, J-W., 23. jan. 2019, I : Non-Coding R N A. 5, 1, s. 1-12 12.

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Clustered Regularly Interspaced Short Palindromic Repeats
Long Noncoding RNA
Gene Targeting
Guide RNA
Gene Knockout Techniques

Rates and pathways of CH4 oxidation in ferruginous Lake Matano, Indonesia

Sturm, A., Fowle, D. A., Jones, C. A., Leslie, K., Nomosatryo, S., Henny, C., Canfield, D. E. & Crowe, S. A., 1. maj 2019, I : Geobiology. 17, 3, s. 294-307

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methane
Indonesia
oxidation
lakes
lake

Rational design of novel fluorescent analogues of cholesterol: a "step-by-step" computational study

Bonvicini, A., Reinholdt, P., Tognetti, V., Joubert, L., Wüstner, D. & Kongsted, J., 24. jun. 2019, I : Physical Chemistry Chemical Physics. 21, 28, s. 15487-15503 17 s.

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multiphoton absorption
cholesterol
Cholesterol
analogs
membranes

Reactivity of magnesium borohydride – Metal hydride composites, γ-Mg(BH4)2-MHx, M = Li, Na, Mg, Ca

Grube, E., Jensen, S. R. H., Nielsen, U. G. & Jensen, T. R., 5. jan. 2019, I : Journal of Alloys and Compounds. 770, January, s. 1155-1163

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Borohydrides
Hydrides
Magnesium
Metals
Synchrotron radiation

Recent Advancements in Computing Reliable Binding Free Energies in Drug Discovery Projects

Murugan, N. A., Poongavanam, V. & Priyakumar, U. D., jan. 2019, Structural Bioinformatics: Applications in Preclinical Drug Discovery Process. Mohan, C. G. (red.). Springer Nature, s. 221-246 26 s. (Challenges and Advances in Computational Chemistry and Physics, Bind 27).

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Free energy
Electronic structure
Pharmaceutical Preparations
Learning systems
Pharmacodynamics

Recent Advances in Anticancer Copper Compounds

Kellett, A., Molphy, Z., McKee, V. & Slator, C., 1. jan. 2019, Metal-based Anticancer Agents. Vessieres, A., Meier-Menches, S. M. & Casini, A. (red.). Royal Society of Chemistry, s. 91-119 (RSC Metallobiology; Nr. 14, Bind 2019-January).

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Copper compounds
Copper
Reactive Nitrogen Species
Cell death
Reactive Oxygen Species
47 Downloads (Pure)

Recommendations for performing, interpreting and reporting hydrogen deuterium exchange mass spectrometry (HDX-MS) experiments

Masson, G. R., Burke, J. E., Ahn, N. G., Anand, G. S., Borchers, C., Brier, S., Bou-Assaf, G. M., Engen, J. R., Englander, S. W., Faber, J., Garlish, R., Griffin, P. R., Gross, M. L., Guttman, M., Hamuro, Y., Heck, A. J. R., Houde, D., Iacob, R. E., Jørgensen, T. J. D., Kaltashov, I. A. & 20 flere, Klinman, J. P., Konermann, L., Man, P., Mayne, L., Pascal, B. D., Reichmann, D., Skehel, M., Snijder, J., Strutzenberg, T. S., Underbakke, E. S., Wagner, C., Wales, T. E., Walters, B. T., Weis, D. D., Wilson, D. J., Wintrode, P. L., Zhang, Z., Zheng, J., Schriemer, D. C. & Rand, K. D., 27. jun. 2019, I : Nature Methods. 16, 7, s. 595-602

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Deuterium
Mass spectrometry
Hydrogen
Experiments
Practice Guidelines

Red Blood Cell Membrane Oxidation/Aging toward Cell Death: Photosensitizer-Mediated Oxidative Stress of Cis-Porphyrin

Kinoshita, K., Scanavachi, G., Tsubone, T., Solovyeva, V., Brewer, J. R. & Itri, R., 15. feb. 2019, s. 416. 1 s.

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Red Blood Cell Membrane Oxidation/Aging toward Cell Death: Photosensitizer-Mediated Oxidative Stress of Cis-Porphyrin

Kinoshita, K., Scanavachi, G., Tsubone, T., Solovyeva, V., Brewer, J. R. & Itri, R., 2019.

Publikation: Konferencebidrag uden forlag/tidsskriftKonferenceabstrakt til konferenceForskningpeer review

Redox-Active Monopyrrolotetrathiafulvalene-Based Rotaxane Incorporating the Dihydroazulene/Vinylheptafulvene Photo/Thermoswitch

Kilde, M. D., Kristensen, R., Olsen, G., Jeppesen, J. O. & Nielsen, M. B., 1. sep. 2019, I : European Journal of Organic Chemistry. 2019, 31-32, s. 5532-5539

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Rotaxanes
Oxidation
Paraquat
Molecules
dihydroazulene

Redox- and EPR-Active Graphene Diiron Complex Nanocomposite

de Sousa, D. P., Yu, J. H., Miller, C. J., Chang, Y., McKenzie, C. J. & Waite, T. D., 24. sep. 2019, I : Langmuir : the ACS journal of surfaces and colloids. 35, 38, s. 12339-12349 11 s.

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Graphite
Graphene
Paramagnetic resonance
Nanocomposites
electron paramagnetic resonance
31 Downloads (Pure)

Re-Evaluating the Age of Deep Biosphere Fossils in the Lockne Impact Structure

Tillberg, M., Ivarsson, M., Drake, H., Whitehouse, M. J., Kooijman, E. & Schmitt, M., 7. maj 2019, I : Geosciences (Switzerland). 9, 5, 22 s., 202.

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impact structure
biosphere
fossil
crater
calcite

Relativistic quantum chemical calculations show that the uranium molecule U2 has a quadruple bond

Knecht, S., Jensen, H. J. A. & Saue, T., jan. 2019, I : Nature Chemistry. 11, s. 40-44

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Actinoid Series Elements
Uranium
Electronic structure
Molecules
Ground state
37 Downloads (Pure)

Remodeling and destabilization of chromosome 1 pericentromeric heterochromatin by SSX proteins

Traynor, S., Møllegaard, N. E., Jørgensen, M. G., Brückmann, N. H., Pedersen, C. B., Terp, M. G., Johansen, S., Dejardin, J., Ditzel, H. J. & Gjerstorff, M. F., 26. jul. 2019, I : Nucleic acids research. 47, 13, s. 6668-6684

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Chromosomes, Human, Pair 1
Proteins
Satellite DNA
DNA Methylation
Epigenomics
41 Downloads (Pure)

Resilience of dynamic coastal benthic ecosystems in response to large-scale finfish farming

Keeley, N., Valdemarsen, T. B., Woodcock, S., Holmer, M., Husa, V. & Bannister, R. J., 25. apr. 2019, I : Aquaculture Environment Interactions. 11, s. 161-179

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finfish
farming systems
sediments
ecosystems
organic wastes
82 Downloads (Pure)

Response properties of embedded molecules through the polarizable embedding model

Steinmann, C., Reinholdt, P., Nørby, M. S., Kongsted, J. & Olsen, J. M. H., 5. jan. 2019, I : International Journal of Quantum Chemistry. 119, 1, 20 s., e25717.

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embedding
Molecules
environment effects
molecules
files

Reversible and Vapochromic Chemisorption of Ammonia by a Copper(ii) Coordination Polymer

Wegeberg, C., Nielsen, D., Mossin, S., Abrahams, B. F., McKee, V. & McKenzie, C. J., 2019, I : Australian Journal of Chemistry. 72, 10, s. 817-826

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Chemisorption
Ammonia
Copper
Polymers
Desorption
30 Downloads (Pure)

Rheological and water holding alterations in mixed gels prepared from whey proteins and rapeseed proteins

Ainis, W. N., Ersch, C., Farinet, C., Yang, Q., Glover, Z. J. & Ipsen, R., feb. 2019, I : Food Hydrocolloids. 87, s. 723-733

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rapeseed protein
whey protein
Gels
gels
Proteins