Det Naturvidenskabelige Fakultet

  • Campusvej 55

    5230 Odense M

Publikationer 1966 2020

2019

Developing an algorithm for autonomous detection of colorectal neoplasia in colon capsule endoscopy

Buijs, M., S. Nadimi, E., Herp, J. & Baatrup, G., 2019.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskningpeer review

Development of a novel automated analytical method for viability assessment of phytoplankton used for validation of ballast water treatment systems

Lundgreen, K., Eckford-Soper, L., Pedersen, K. L. & Holbech, H., 1. okt. 2019, I : Journal of Applied Phycology. 31, 5, s. 2941-2955

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ballast water
water treatment
analytical methods
analytical method
viability

Did evolution create a flexible ligand-binding cavity in the urokinase receptor through deletion of a plesiotypic disulfide bond?

Leth, J. M., Mertens, H. D. T., Leth-Espensen, K. Z., Jørgensen, T. J. D. & Ploug, M., 3. maj 2019, I : Journal of Biological Chemistry. 294, 18, s. 7403-7418

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Urokinase-Type Plasminogen Activator
Disulfides
Ligands
Cysteine
Snake Venoms

Differential Ion Mobility Separations/Mass Spectrometry with High Resolution in Both Dimensions

Baird, M. A., Anderson, G. A., Shliaha, P. V., Jensen, O. N. & Shvartsburg, A. A., 15. jan. 2019, I : Analytical Chemistry. 91, 2, s. 1479-1485 7 s.

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Pulse time modulation
Ultrahigh vacuum
Mass spectrometers
Isomers
Histones

Direct Generation of Tunable Orbital Angular Momentum Beams in Microring Lasers with Broadband Exceptional Points

Hayenga, W. E., Parto, M., Ren, J., Wu, F. O., Hokmabadi, M. P., Wolff, C., El-Ganainy, R., Mortensen, N. A., Christodoulides, D. N. & Khajavikhan, M., 21. aug. 2019, I : ACS Photonics. 6, 8, s. 1895-1901

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Angular momentum
angular momentum
Information Science
broadband
orbitals

DirectMS1: MS/MS-free identification of 1000 proteins of cellular proteomes in 5 minutes

Ivanov, M. V., Bubis, J. A., Gorshkov, V., Tarasova, I. A., Levitsky, L. I., Lobas, A. A., Solovyeva, E. M., Pridatchenko, M. L., Kjeldsen, F. & Gorshkov, M. V., 5. sep. 2019, I : BioRxiv. 17 s.

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Direct observation of nuclear receptor dynamics by single molecule tracking and imaging of intrinsically fluorescent ligands

Wüstner, D., 2019.

Publikation: Konferencebidrag uden forlag/tidsskriftPosterForskningpeer review

21 Downloads (Pure)

Discovery of piperidine-substituted thiazolo[5,4-d]pyrimidine derivatives as potent and orally bioavailable HIV-1 non-nucleoside reverse transcriptase inhibitors

Kang, D., Zhao, T., Wang, Z., Feng, D., Zhang, H., Huang, B., Wu, G., Wei, F., Zhou, Z., Jing, L., Zuo, X., Tian, Y., Poongavanam, V., Kongsted, J., De Clercq, E., Pannecouque, C., Zhan, P. & Liu, X., 2019, I : Communications Chemistry. 2, 8 s., 74.

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Reverse Transcriptase Inhibitors
HIV-1
etravirine
Pharmacokinetics
Pharmaceutical Preparations

Distinct nitrogen cycling and steep chemical gradients in Trichodesmium colonies

Klawonn, I., Eichner, M. J., Wilson, S. T., Moradi, N., Thamdrup, B., Kümmel, S., Gehre, M., Khalili, A., Grossart, H. P., Karl, D. M. & Ploug, H., 1. jan. 2019, (Accepteret/In press) I : ISME Journal.

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Trichodesmium
Nitrogen
nitrates
nitrogen
Nitrogen Fixation

DNA- and RNA-SIP Reveal Nitrospira spp. as Key Drivers of Nitrification in Groundwater-Fed Biofilters

Gülay, A., Fowler, S. J., Tatari, K., Thamdrup, B., Albrechtsen, H. J., Al-Soud, W. A., Sørensen, S. J. & Smets, B. F., 5. nov. 2019, I : mBio. 10, 6

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Ammonia
Isotopes
RNA
DNA
Microbiota

DNA methylome profiling in identical twin pairs discordant for body mass index

Li, W., Zhang, D., Wang, W., Wu, Y., Mohammadnejad, A., Lund, J., Baumbach, J., Christiansen, L. & Tan, Q., 31. maj 2019, I : International Journal of Obesity. 9 s.

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Monozygotic Twins
Body Mass Index
DNA Methylation
Epigenomics
Adiposity
70 Downloads (Pure)

DNA methylome profiling of all-cause mortality in comparison with age-associated methylation patterns

Lund, J., Li, S., Baumbach, J., Svane, A. M., Hjelmborg, J. V. B., Christiansen, L., Christensen, K., Redmond, P., Marioni, R. E., Deary, I. J. & Tan, Q., 8. feb. 2019, I : Clinical Epigenetics. 11, 8 s., 23.

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DNA Methylation
Genome-Wide Association Study
Survival Analysis
Proportional Hazards Models
Epigenomics
49 Downloads (Pure)

DNA repair in plant mitochondria - A complete base excision repair pathway in potato tuber mitochondria

Ferrando, B., de Matos Furlanetto, A. L. D., Gredilla, R., Havelund, J. F., Hebelstrup, K. H., Møller, I. M. & Stevnsner, T., jun. 2019, I : Physiologia Plantarum. 166, 2, s. 494-512

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DNA repair
tubers
mitochondria
potatoes
oxidative stress

Does hepatotoxicity interfere with endocrine activity in zebrafish (Danio rerio)?

Baumann, L., Holbech, H., Schmidt-Posthaus, H., Moissl, A. P., Hennies, M., Tiedemann, J., Weltje, L., Segner, H. & Braunbeck, T., 14. aug. 2019, I : Chemosphere. 238, s. 124589

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OECD
biomarker
endocrine system
histopathology
gene

Does teaching about artificial reefs trigger students’ situational interest in marine biology?

Seidelin, L., Albrechtsen, T. S. R., Schöps, K., Holmer, M. & Wahlberg, M., 15. okt. 2019, I : Journal of Biological Education.

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Marine Biology
artificial reefs
biology
students
Biological Sciences
17 Downloads (Pure)

Down-regulation of CK2α correlates with decreased expression levels of DNA replication minichromosome maintenance protein complex (MCM) genes

Schaefer, S., Doktor, T. K., Brøner Frederiksen, S., Chea, K., Hlavacova, M., Bruun, G. H., Rabjerg, M., Andresen, B. S., Dominguez, I. & Guerra, B., 2019, I : Scientific Reports. 9, 1, 16 s., 14581.

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Minichromosome Maintenance Proteins
Casein Kinase II
Cell Cycle
Down-Regulation
Catalytic Domain
61 Downloads (Pure)

Draft Genome Sequence of Chromatium okenii Isolated from the Stratified Alpine Lake Cadagno

Luedin, S. M., Liechti, N., Cox, R. P., Danza, F., Frigaard, N-U., Posth, N. R., Pothier, J. F., Roman, S., Storelli, N., Wittwer, M. & Tonolla, M., 13. feb. 2019, I : Scientific Reports. 9, 1, s. 1-14 1936.

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Chromatium
Lakes
RNA
Research
Proteins
51 Downloads (Pure)

Dual renormalization group flows in 4D

Abel, S., Bajc, B. & Sannino, F., 15. mar. 2019, I : Physical Review D. 99, 6, 13 s., 065001.

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equivalence
Lagrange multipliers
51 Downloads (Pure)

Dynamical stabilisation of complex Langevin simulations of QCD

Attanasio, F. & Jäger, B., 1. jan. 2019, I : European Physical Journal C. 79, 1, 11 s., 16.

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Chemical potential
Stabilization
stabilization
quantum chromodynamics
baryons

Dynamic Metasurfaces Using Phase‐Change Chalcogenides

Ding, F., Yang, Y. & Bozhevolnyi, S. I., 18. jul. 2019, I : Advanced Optical Materials. 7, 14, 15 s., 1801709.

Publikation: Bidrag til tidsskriftReviewForskningpeer review

Chalcogenides
chalcogenides
phase change materials
Phase change materials
Nanophotonics
61 Downloads (Pure)

Dynamic rating of three-core XLPE submarine cables for offshore wind farms

Nielsen, T. V. M., Jakobsen, S. & Savaghebi, M., 25. feb. 2019, I : Applied Sciences (Switzerland). 9, 4, 21 s., 800.

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submarine cables
Submarine cables
Offshore wind farms
Cable cores
ratings
49 Downloads (Pure)

Dynamics of dense hard sphere colloidal systems: A numerical analysis

Sibani, P. & Svaneborg, C., 17. apr. 2019, I : Physical Review E. Statistical, Nonlinear, and Soft Matter Physics. 99, 4, 8 s., 042607.

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numerical analysis
colloids
poisson process
logarithms
phenomenology
34 Downloads (Pure)

d = 4 as the critical dimensionality of asymptotically safe interactions

Eichhorn, A. & Schiffer, M., 10. jun. 2019, I : Physics Letters, Section B: Nuclear, Elementary Particle and High-Energy Physics. 793, s. 383-389 7 s.

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universe
poles
interactions
gravitation
47 Downloads (Pure)

E. coli gene regulatory networks are inconsistent with gene expression data

Larsen, S. J., Röttger, R., Schmidt, H. H. H. W. & Baumbach, J., 10. jan. 2019, I : Nucleic acids research. 47, 1, s. 85-92

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Systems Biology
Cell Biology
31 Downloads (Pure)

Early cosmological evolution of primordial electromagnetic fields

Kobayash, T. & Sloth, M. S., 15. jul. 2019, I : Physical Review D (Particles, Fields, Gravitation and Cosmology). 100, 2, 16 s., 023524.

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Early Silurian δ 13 C org excursions in the foreland basin of Baltica, both familiar and surprising

Hammarlund, E. U., Loydell, D. K., Nielsen, A. T. & Schovsbo, N. H., 15. jul. 2019, I : Palaeogeography, Palaeoclimatology, Palaeoecology. 526, s. 126-135

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Baltica
foreland basin
Silurian
carbon isotope
isotopes
34 Downloads (Pure)

Edge-dependent reflection and inherited fine structure of higher-order plasmons in graphene nanoribbons

Wedel, K. O., Mortensen, N. A., Thygesen, K. S. & Wubs, M., 8. jan. 2019, I : Physical Review B Condensed Matter. 99, 4, 10 s., 045411.

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Nanoribbons
Carbon Nanotubes
Plasmons
Graphite
plasmons
51 Downloads (Pure)

EEG discrimination of perceptually similar tastes

Andersen, C. A., Kring, M. L., Andersen, R. H., Larsen, O. N., Kjaer, T. W., Kidmose, U., Møller, S. & Kidmose, P., mar. 2019, I : Journal of Neuroscience Research. 97, 3, s. 241-252

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Electroencephalography
Discrimination (Psychology)
Multivariate Analysis

Effects on biodiversity, physical conditions and sediment in streams receiving stormwater discharge treated and delayed in wet ponds

Koziel, L., Juhl, M. & Egemose, S., mar. 2019, I : Limnologica. 75, s. 11-18

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stormwater
pond
biodiversity
sediments
sediment

Effekter af droslede regnudløb på vandløb

Egemose, S., Koziel, L., Karlsen, C., Juhl, M. & Flindt, M., sep. 2019, I : Vand & Jord.

Publikation: Bidrag til tidsskriftTidsskriftartikelForskning

23 Downloads (Pure)

Efficient algorithms to discover alterations with complementary functional association in cancer

Basso, R. S., Hochbaum, D. S. & Vandin, F., 1. maj 2019, I : PloS Computational Biology. 15, 5, 24 s., e1006802.

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cancer
Cancer
Efficient Algorithms
Genes
neoplasms

Efficient broadband infrared absorbers based on core-shell nanostructures

Parsamyan, H. A., Nerkararyan, K. V. & Bozhevolnyi, S. I., 1. jan. 2019, I : Journal of the Optical Society of America B: Optical Physics. 36, 10, s. 2643-2649 7 s.

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningpeer review

absorbers
broadband
infrared absorption
configurations
metals

ELKI: A large open-source library for data analysis: ELKI Release 0.7.5 "Heidelberg"

Schubert, E. & Zimek, A., 10. feb. 2019, I : arxiv.org. 134 s., abs/1902.03616.

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Data mining
Cluster analysis
Benchmarking
Scalability
Students

Emergent structure in a stochastic model of ecological evolution

Roach, T. N. F., Nulton, J., Sibani, P., Rohwer, F. & Salamon, P., 2019, I : Ecological Modelling. 401, June, s. 129-133

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Engineering the Yeast Saccharomyces cerevisiae for the Production of L-(+)-Ergothioneine

van der Hoek, S. A., Darbani, B., Zugaj, K. E., Prabhala, B. K., Biron, M. B., Randelovic, M., Medina, J. B., Kell, D. B. & Borodina, I., 11. okt. 2019, I : Frontiers in Bioengineering and Biotechnology. 7, 262.

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Ergothioneine
Yeast
Saccharomyces cerevisiae
Dietary Supplements
Dietary supplements
54 Downloads (Pure)

Enhanced trypsin on a budget: Stabilization, purification and high-temperature application of inexpensive commercial trypsin for proteomics applications

Heissel, S., Frederiksen, S. J., Bunkenborg, J. & Højrup, P., 27. jun. 2019, I : PLOS ONE. 14, 6, 16 s., e0218374.

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High temperature applications
proteomics
Trypsin
trypsin
Purification
10 Downloads (Pure)

Enriched power of disease-concordant twin-case-only design in detecting interactions in genome-wide association studies

Li, W., Baumbach, J., Mohammadnejad, A., Brasch-Andersen, C., Vandin, F., Korbel, J. O. & Tan, Q., 1. apr. 2019, I : European Journal of Human Genetics. 27, 4, s. 631-636

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Dizygotic Twins
Genome-Wide Association Study
Sample Size
Siblings
Monozygotic Twins
73 Downloads (Pure)

Environmental and meteorological factors linked to malaria transmission around large dams at three ecological settings in Ethiopia

Kibret, S., Wilson, G., Ryder, D., Tekie, H. & Petros, B., 26. feb. 2019, I : Malaria Journal. 18, 16 s., 54.

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Ethiopia
Malaria
Incidence
Africa South of the Sahara
Regression Analysis

Enzymes Immobilized on Carbon Nitride (C3N4) Cooperating with Metal Nanoparticles for Cascade Catalysis

Wang, Y., Zhang, N., Hübner, R., Tan, D., Löffler, M., Facsko, S., Zhang, E., Ge, Y., Qi, Z. & Wu, C., 2019, I : Advanced Materials Interfaces. 6, 6, 1801664.

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Carbon nitride
Metal nanoparticles
Catalysis
Biocatalysts
Enzymes

Ephemeral data handling in microservices

Giallorenzo, S., Montesi, F., Safina, L. & Zingaro, S. P., 2019, Proceedings of the 2019 IEEE International Conference on Services Computing, SCC 2019 - Part of the 2019 IEEE World Congress on Services. Bertino, E., Chang, C. K., Chen, P., Damiani, E., Damiani, E., Goul, M. & Oyama, K. (red.). IEEE, s. 234-236 (IEEE International Conference on Services Computing (SCC), Bind 2019).

Publikation: Bidrag til bog/antologi/rapport/konference-proceedingKonferencebidrag i proceedingsForskningpeer review

Data handling
Query languages
Internet of things

Er modellering vejen frem?

Auning, C. & Michelsen, C., 30. jun. 2019, Universitetsskolen: mellem forskning, uddannelse og skoleudvikling. von Oettingen, A. & Thorgård, K. (red.). Frederikshavn: Dafolo, 13 s. (Undervisning og læring).

Publikation: Bidrag til bog/antologi/rapport/konference-proceedingBidrag til bog/antologiForskning

Establishing a many-cytokine signature via multivariate anomaly detection

Dingle, K., Zimek, A., Azizieh, F. & Ansari, A. R., 1. dec. 2019, I : Scientific Reports. 9, 1, 13 s., 9684.

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Pregnancy Complications
Allergy and Immunology
Reference Values
Datasets
14 Downloads (Pure)

Estimating Respiration Rates and Secondary Production of Macrobenthic Communities Across Coastal Habitats with Contrasting Structural Biodiversity

Rodil, I. F., Attard, K. M., Norkko, J., Glud, R. N. & Norkko, A., 8. aug. 2019, I : Ecosystems. 18 s.

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secondary productivity
secondary production
Biodiversity
respiratory rate
Fucus

Etoposide transport in MDCKII-MRP2 cells is unaffected by P-gp expression and commonly used pharmaceutical excipients

Nielsen, S., Westerhoff, A. M., Gé, L. G., Lundgaard Carlsen, K., Pedersen, M. & Nielsen, C. U., 13. jan. 2019.

Publikation: Konferencebidrag uden forlag/tidsskriftKonferenceabstrakt til konferenceForskningpeer review

41 Downloads (Pure)

European hedgehogs (Erinaceus europaeus) as a natural reservoir of methicillin-resistant Staphylococcus aureus carrying mecC in Denmark

Rasmussen, S. L., Larsen, J., van Wijk, R. E., Jones, O. R., Berg, T. B., Angen, Ø. & Larsen, A. R., 6. sep. 2019, I : PLOS ONE. 14, 9, 13 s., e0222031.

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Erinaceus europaeus
Methicillin
Erinaceidae
Denmark
methicillin-resistant Staphylococcus aureus

Evaluation and experimental design in data mining and machine learning: Motivation and summary of EDML 2019

Ntoutsi, E., Schubert, E., Zimek, A. & Zimmermann, A., 2019, I : CEUR Workshop Proceedings. 2436

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Evidence for ATP Interaction with Phosphatidylcholine Bilayers

Garcia, A., Pochinda, S., Elgaard-Jørgensen, P. N., Khandelia, H. & Clarke, R. J., 30. jul. 2019, I : Langmuir. 35, 30, s. 9944-9953 10 s.

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adenosine triphosphate
Adenosinetriphosphate
Phosphatidylcholines
Adenosine Triphosphate
interactions
51 Downloads (Pure)

Excision of uracil from DNA by hSMUG1 includes strand incision and processing

Alexeeva, M., Moen, M. N., Grøsvik, K., Tesfahun, A. N., Xu, X. M., Muruzábal-Lecumberri, I., Olsen, K. M., Rasmussen, A., Ruoff, P., Kirpekar, F., Klungland, A. & Bjelland, S., 2019, I : Nucleic Acids Research. 47, 2, s. 779-793

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Uracil
DNA
Uracil-DNA Glycosidase
Enzymes
Deamination
sponge
pumps
pump
explants
microscopes

Experimental determination of pyrite and molybdenite oxidation kinetics at nanomolar oxygen concentrations

Johnson, A. C., Romaniello, S. J., Reinhard, C. T., Gregory, D. D., Garcia-Robledo, E., Revsbech, N. P., Canfield, D. E., Lyons, T. W. & Anbar, A. D., 15. mar. 2019, I : Geochimica et Cosmochimica Acta. 249, s. 160-172

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molybdenite
pyrite
oxidation
kinetics
oxygen